RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SCAF4O95104 1147 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 RAB13P51153 203 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 FKBP11Q9NYL4 201 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 USP9XQ93008 2570 aaPredicted RBP16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 C9JQL5 133 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 RNF224P0DH78 156 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 FGF7P21781 194 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 CCL20P78556 96 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 PRCDQ00LT1 54 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 TLE4Q04727 773 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 GUK1Q16774 197 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 CENPVQ7Z7K6 275 aaPredicted RBP16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 PNKDQ8N490 385 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 TIMM9Q9Y5J7 89 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 MED13LQ71F56 2210 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 IGHV3-72A0A0B4J1Y9 119 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 F8W036 122 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 OVOL3O00110 214 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 IGLV2-23P01705 113 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 MDKP21741 143 aaPredicted RBP16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 RAB11AP62491 216 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 DEFA5Q01523 94 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 SP5Q6BEB4 398 aaPredicted RBP16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 LFNGQ8NES3 379 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 OR4P4Q8NGL7 312 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 SFT2D1Q8WV19 159 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 RITA1Q96K30 269 aa16.06■□□□□ 0.16
PDLIM5-205ENST00000380180 PRSS46E5RG02 174 aa16.05■□□□□ 0.16
PDLIM5-205ENST00000380180 ENSAO43768 121 aaKnown RBP16.05■□□□□ 0.16
PDLIM5-205ENST00000380180 CD1BP29016 333 aa16.05■□□□□ 0.16
PDLIM5-205ENST00000380180 C10orf91Q5T1B1 145 aa16.05■□□□□ 0.16
PDLIM5-205ENST00000380180 SLC24A4Q8NFF2 622 aa16.05■□□□□ 0.16
PDLIM5-205ENST00000380180 EIF5A2Q9GZV4 153 aaKnown RBP16.05■□□□□ 0.16
PDLIM5-205ENST00000380180 PLEKHA3Q9HB20 300 aa16.05■□□□□ 0.16
PDLIM5-205ENST00000380180 SIRT7Q9NRC8 400 aa16.05■□□□□ 0.16
PDLIM5-205ENST00000380180 INSIG2Q9Y5U4 225 aa16.05■□□□□ 0.16
PDLIM5-205ENST00000380180 IFNA4P05014 189 aa16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 USF1P22415 310 aaPredicted RBP16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 OR5B3Q8NH48 314 aa16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 IGHV1-3A0A0C4DH29 117 aa16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 FAM157AC9JC47 383 aa16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 NPY1RP25929 384 aa16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 ELLP55199 621 aaPredicted RBP16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 RPL8P62917 257 aaKnown RBP16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 ATRAIDQ6UW56 229 aa16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 VSTM2AQ8TAG5 236 aa16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 TMEM167AQ8TBQ9 72 aa16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 SEC11CQ9BY50 192 aa16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 NPCDR1Q9BY65 106 aa16.04■□□□□ 0.16
PDLIM5-205ENST00000380180 COL12A1Q99715 3063 aa16.03■□□□□ 0.16
PDLIM5-205ENST00000380180 M0R1W7 72 aa16.03■□□□□ 0.16
PDLIM5-205ENST00000380180 CA2P00918 260 aa16.03■□□□□ 0.16
PDLIM5-205ENST00000380180 SFTA3P0C7M3 94 aa16.03■□□□□ 0.16
PDLIM5-205ENST00000380180 PEA15Q15121 130 aa16.03■□□□□ 0.16
PDLIM5-205ENST00000380180 TMEM41BQ5BJD5 291 aa16.03■□□□□ 0.16
PDLIM5-205ENST00000380180 OR4A5Q8NH83 315 aa16.03■□□□□ 0.16
PDLIM5-205ENST00000380180 GGACTQ9BVM4 153 aa16.03■□□□□ 0.16
PDLIM5-205ENST00000380180 COMMD5Q9GZQ3 224 aa16.03■□□□□ 0.16
PDLIM5-205ENST00000380180 AMMECR1Q9Y4X0 333 aaPredicted RBP16.03■□□□□ 0.16
PDLIM5-205ENST00000380180 MYO18BQ8IUG5 2567 aa16.03■□□□□ 0.16
PDLIM5-205ENST00000380180 BTBD17A6NE02 478 aa16.02■□□□□ 0.16
PDLIM5-205ENST00000380180 LY6LH3BQJ8 138 aa16.02■□□□□ 0.16
PDLIM5-205ENST00000380180 ZFP36P26651 326 aaKnown RBP16.02■□□□□ 0.16
PDLIM5-205ENST00000380180 MOB3BQ86TA1 216 aa16.02■□□□□ 0.16
PDLIM5-205ENST00000380180 RPEQ96AT9 228 aa16.02■□□□□ 0.16
PDLIM5-205ENST00000380180 CARHSP1Q9Y2V2 147 aaKnown RBP16.02■□□□□ 0.16
PDLIM5-205ENST00000380180 LGALS7P47929 136 aa16.02■□□□□ 0.15
PDLIM5-205ENST00000380180 ZNF726P1Q15940 193 aa16.02■□□□□ 0.15
PDLIM5-205ENST00000380180 GUCA2BQ16661 112 aa16.02■□□□□ 0.15
PDLIM5-205ENST00000380180 ACSM6Q6P461 480 aa16.02■□□□□ 0.15
PDLIM5-205ENST00000380180 OR10W1Q8NGF6 305 aa16.02■□□□□ 0.15
PDLIM5-205ENST00000380180 PBDC1Q9BVG4 233 aa16.02■□□□□ 0.15
PDLIM5-205ENST00000380180 NDUFA4L2Q9NRX3 87 aa16.02■□□□□ 0.15
PDLIM5-205ENST00000380180 WDR83OSQ9Y284 106 aa16.02■□□□□ 0.15
PDLIM5-205ENST00000380180 SMCO3A2RU48 225 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 SLC25A17O43808 307 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 GOSR1O95249 250 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 IGHV2-5P01817 119 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 DLK1P80370 383 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 VMA21Q3ZAQ7 101 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 TREML4Q6UXN2 200 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 ZNF709Q8N972 641 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 OR11H6Q8NGC7 330 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 TRAV1-1A0A0B4J248 108 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 A0A1B0GW64 132 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 E7EUB6 86 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 IGKV1D-33P01593 117 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 IGKV1-33P01594 117 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 HBE1P02100 147 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 PRTN3P24158 256 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 RAB2AP61019 212 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 LDLRAD2Q5SZI1 272 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 SSX7Q7RTT5 188 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 ZNF843Q8N446 348 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 OR1L8Q8NGR8 309 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 RCC1LQ96I51 464 aaKnown RBP16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 RARRES2Q99969 163 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 ZNF430Q9H8G1 570 aaPredicted RBP16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 KIAA1456Q9P272 454 aa16.01■□□□□ 0.15
PDLIM5-205ENST00000380180 PPT1P50897 306 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms