RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 VAX1Q5SQQ9 334 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 SP5Q6BEB4 398 aaPredicted RBP12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 SLC25A28Q96A46 364 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 SAA1P0DJI8 122 aaPredicted RBP12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 TDGF1P13385 188 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 SERF2P84101 59 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 SEPSECSQ9HD40 501 aaKnown RBP12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 CBLN1P23435 193 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 RND3P61587 244 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 ASPHD2Q6ICH7 369 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 SELENOTP62341 195 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 CLPPQ16740 277 aaPredicted RBP12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 CYB5R2Q6BCY4 276 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 SFTA2Q6UW10 78 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 OR1P1Q8NH06 330 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 GALNT14Q96FL9 552 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 C1QTNF9BB2RNN3 333 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 CGAP01215 116 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 C1QTNF9P0C862 333 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 LEMD1Q68G75 181 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 TRBV5-5A0A0J9YX44 114 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 CD1AP06126 327 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 FABP2P12104 132 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 CENPWQ5EE01 88 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 FAM71F2Q6NXP2 309 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 ZNF837Q96EG3 531 aaPredicted RBP12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 IMMP2LQ96T52 175 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 CDC42EP3Q9UKI2 254 aa12.48□□□□□ -0.41
NOTCH4-201ENST00000375023 H2BFSP57053 126 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 ZNF660Q6AZW8 331 aaPredicted RBP12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 PUSL1Q8N0Z8 303 aaKnown RBP12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 ZNF107Q9UII5 783 aaPredicted RBP12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 LTBP4Q8N2S1 1624 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 AGAP20933 346 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 TTC9CQ8N5M4 171 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 TMEM45BQ96B21 275 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 AQP10Q96PS8 301 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 FBXL7Q9UJT9 491 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 NDUFA3O95167 84 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 IGFBP2P18065 325 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 TMEM106BQ9NUM4 274 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 PGPEP1Q9NXJ5 209 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 APOBEC3AP31941 199 aaPredicted RBP12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 COX19Q49B96 90 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 OR10S1Q8NGN2 331 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 SOX21Q9Y651 276 aaPredicted RBP12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 TMEM238LA0A1B0GVL6 79 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 A6NJY4 79 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 SIAH2O43255 324 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 CECR9P0C854 216 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 SMAGPQ0VAQ4 97 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 ZNF506Q5JVG8 444 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 KCNS1Q96KK3 526 aa12.47□□□□□ -0.41
NOTCH4-201ENST00000375023 C7orf66A4D0T2 115 aa12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 LHBP01229 141 aa12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 CBLN4Q9NTU7 201 aa12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 TSPAN13O95857 204 aa12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 FSTP19883 344 aa12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 NUTF2P61970 127 aaKnown RBP12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 RPS11P62280 158 aaKnown RBP eCLIP12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 SFXN3Q9BWM7 321 aa12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 CLPSP04118 112 aa12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 ZNF345Q14585 488 aa12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 SSC4DQ8WTU2 575 aa12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 OR5P3Q8WZ94 311 aa12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 PPP1R3EQ9H7J1 279 aa12.46□□□□□ -0.41
NOTCH4-201ENST00000375023 EGR4Q05215 589 aa12.46□□□□□ -0.42
NOTCH4-201ENST00000375023 Q96M66 194 aa12.46□□□□□ -0.42
NOTCH4-201ENST00000375023 GDF15Q99988 308 aa12.46□□□□□ -0.42
NOTCH4-201ENST00000375023 TRAV40A0A0B4J280 105 aa12.46□□□□□ -0.42
NOTCH4-201ENST00000375023 CIRBPQ14011 172 aaKnown RBP12.46□□□□□ -0.42
NOTCH4-201ENST00000375023 SFRP2Q96HF1 295 aa12.46□□□□□ -0.42
NOTCH4-201ENST00000375023 CABIN1Q9Y6J0 2220 aa12.46□□□□□ -0.42
NOTCH4-201ENST00000375023 GGCTO75223 188 aaKnown RBP12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 HOXD4P09016 255 aaPredicted RBP12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 STPG2Q8N412 459 aa12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 HEATR5BQ9P2D3 2071 aa12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 SEC16AO15027 2179 aa12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 TNFRSF18Q9Y5U5 241 aa12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 CRPP02741 224 aa12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 CCL3L1P16619 93 aa12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 TMEM187Q14656 261 aa12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 JPT1Q9UK76 154 aa12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 CYP2G1PQ6ZSU1 146 aa12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 KIR2DL4Q99706 377 aa12.45□□□□□ -0.42
NOTCH4-201ENST00000375023 TRAV12-3A0A0B4J271 114 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 MPTX1A8MV57 137 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 ZP1P60852 638 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 TBR1Q16650 682 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 COL4A5P29400 1685 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 SCO2A0A1W2PP80 73 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 LINC00862A6NCI5 91 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 C17orf98A8MV24 154 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 IL6RP08887 468 aaPredicted RBP12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 DNASE2BQ8WZ79 361 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 MRPS18AQ9NVS2 196 aaKnown RBP12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 M0QZK8 103 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 FXYD7P58549 80 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 TMEM54Q969K7 222 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 MRPL20Q9BYC9 149 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms