RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 IGKV1-33P01594 117 aa14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 IFNA4P05014 189 aa14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 NPY1RP25929 384 aa14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 IL3RAP26951 378 aa14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 FGF8P55075 233 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 ERVFRD-1P60508 538 aa14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 TMEM177Q53S58 311 aa14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 ABHD12Q8N2K0 398 aa14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 CYB561D1Q8N8Q1 229 aa14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 SLC24A4Q8NFF2 622 aa14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 KCNIP2Q9NS61 270 aa14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 PUS1Q9Y606 427 aaKnown RBP eCLIP14.93□□□□□ -0.02
PDLIM7-203ENST00000359895 H0YJW9 148 aa14.92□□□□□ -0.02
PDLIM7-203ENST00000359895 NDUFS6O75380 124 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-203ENST00000359895 ZNF137PP52743 207 aa14.92□□□□□ -0.02
PDLIM7-203ENST00000359895 PRCDQ00LT1 54 aa14.92□□□□□ -0.02
PDLIM7-203ENST00000359895 PDPNQ86YL7 162 aa14.92□□□□□ -0.02
PDLIM7-203ENST00000359895 PCGF1Q9BSM1 259 aa14.92□□□□□ -0.02
PDLIM7-203ENST00000359895 PLEKHA3Q9HB20 300 aa14.92□□□□□ -0.02
PDLIM7-203ENST00000359895 ZNRD1Q9P1U0 126 aa14.92□□□□□ -0.02
PDLIM7-203ENST00000359895 SMG1Q96Q15 3661 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 A0A1W2PPH5 198 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 SMCO3A2RU48 225 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 FNDC10F2Z333 226 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 H3BQ15 152 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 IGKV1-16P04430 117 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 IGHV1-8P0DP01 117 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 OPRK1P41145 380 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 FLI1Q01543 452 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 LY6DQ14210 128 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 OR5B3Q8NH48 314 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 OR4A5Q8NH83 315 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 TNFRSF14Q92956 283 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 NEIL1Q96FI4 390 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 NIPSNAP3BQ9BS92 247 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 RAB1BQ9H0U4 201 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 NPVFQ9HCQ7 196 aa14.91□□□□□ -0.02
PDLIM7-203ENST00000359895 COLCA2A8K830 154 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 IGHV2-70P01814 119 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 SAA1P0DJI8 122 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 COL8A2P25067 703 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 HNF4GQ14541 408 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 FAM122CQ6P4D5 195 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 TREML4Q6UXN2 200 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 SLC35E3Q7Z769 313 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 TMEM170AQ8WVE7 144 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 ST6GALNAC6Q969X2 333 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 FLYWCH2Q96CP2 140 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 TVP23CQ96ET8 276 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 HARBI1Q96MB7 349 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 C20orf24Q9BUV8 137 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 SLC25A22Q9H936 323 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 MANBALQ9NQG1 85 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 ROS1P08922 2347 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 SRRM4A7MD48 611 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 RAB13P51153 203 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 CEBPGP53567 150 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 CDSNQ15517 529 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 AVPI1Q5T686 147 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 Q8N7P7 452 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 OR4C13Q8NGP0 309 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 VSTM2AQ8TAG5 236 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 NABP2Q9BQ15 211 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 TMEM133Q9H2Q1 129 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 MLXQ9UH92 298 aa14.9□□□□□ -0.02
PDLIM7-203ENST00000359895 PKDREJQ9NTG1 2253 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 TEX50A0A1B0GTY4 177 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 SEC14L6B5MCN3 397 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 CA2P00918 260 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 RBP4P02753 201 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 FBP1P09467 338 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 USF1P22415 310 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 MC5RP33032 325 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 AKR1C3P42330 323 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 CDC34P49427 236 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 PSMB3P49720 205 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 RAB1CQ92928 201 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 RAB24Q969Q5 203 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 HINT2Q9BX68 163 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 CBLN4Q9NTU7 201 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 WASHC3Q9Y3C0 194 aa14.89□□□□□ -0.03
PDLIM7-203ENST00000359895 A0A087WWC5 75 aa14.88□□□□□ -0.03
PDLIM7-203ENST00000359895 FOLR2P14207 255 aa14.88□□□□□ -0.03
PDLIM7-203ENST00000359895 RAB31Q13636 194 aa14.88□□□□□ -0.03
PDLIM7-203ENST00000359895 TMEM249Q2WGJ8 235 aa14.88□□□□□ -0.03
PDLIM7-203ENST00000359895 TGIF2LXQ8IUE1 241 aa14.88□□□□□ -0.03
PDLIM7-203ENST00000359895 MIOXQ9UGB7 285 aa14.88□□□□□ -0.03
PDLIM7-203ENST00000359895 B4DEV8 164 aa14.87□□□□□ -0.03
PDLIM7-203ENST00000359895 MT-ND4LP03901 98 aa14.87□□□□□ -0.03
PDLIM7-203ENST00000359895 PRRX1P54821 245 aa14.87□□□□□ -0.03
PDLIM7-203ENST00000359895 PNRC1Q12796 327 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-203ENST00000359895 FAM90A2PQ658T7 463 aa14.87□□□□□ -0.03
PDLIM7-203ENST00000359895 ZNF841Q6ZN19 808 aa14.87□□□□□ -0.03
PDLIM7-203ENST00000359895 TMEM167AQ8TBQ9 72 aa14.87□□□□□ -0.03
PDLIM7-203ENST00000359895 MGST2Q99735 147 aa14.87□□□□□ -0.03
PDLIM7-203ENST00000359895 LSM4Q9Y4Z0 139 aaKnown RBP14.87□□□□□ -0.03
PDLIM7-203ENST00000359895 LYNX1G3V0Z9 82 aa14.86□□□□□ -0.03
PDLIM7-203ENST00000359895 KALRNO60229 2985 aa14.86□□□□□ -0.03
PDLIM7-203ENST00000359895 LYNX1P0DP58 116 aa14.86□□□□□ -0.03
PDLIM7-203ENST00000359895 RPL8P62917 257 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms