RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 TMEM140Q9NV12 185 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 FZR1Q9UM11 496 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 SLC45A2Q9UMX9 530 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 PCP4L1A6NKN8 68 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 SRRM4A7MD48 611 aaKnown RBP4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 C3orf80F5H4A9 247 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 LINC00869P0C866 280 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 GPR12P47775 334 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 GABRA2P47869 451 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 RPP30P78346 268 aaKnown RBP4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 TPTE2P1Q5T6R2 138 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 ZNF343Q6P1L6 599 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 C10orf105Q8TEF2 133 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 TAF15Q92804 592 aaKnown RBP eCLIP4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 CCL13Q99616 98 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 PDCD10Q9BUL8 212 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 PSG11Q9UQ72 335 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 PIEZO2Q9H5I5 2752 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 IGHV3OR15-7A0A075B7D8 119 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 TEX50A0A1B0GTY4 177 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 LOC102723971A0A1B0GUV8 181 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 IGLC7A0M8Q6 106 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 TMPRSS2O15393 492 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 RBMXL2O75526 392 aaKnown RBP4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 ATP6V0CP27449 155 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 ERVFRD-1P60508 538 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 HOXA4Q00056 320 aaPredicted RBP4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 FAM53AQ6NSI3 398 aaPredicted RBP4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 OR4C13Q8NGP0 309 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 PRELID3BQ9Y3B1 194 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 WASHC3Q9Y3C0 194 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 IGKV1D-37A0A075B6S9 117 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 PHOX2AO14813 284 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 SERPINE2P07093 398 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 GATA3P23771 443 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 PPT1P50897 306 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 FXYD4P59646 89 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 NHLH2Q02577 135 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 KHDC3LQ587J8 217 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 TMEM116Q8NCL8 245 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 NEK7Q8TDX7 302 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 DTD1Q8TEA8 209 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 QTRT1Q9BXR0 403 aaKnown RBP4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 ACACAQ13085 2346 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 HEATR1Q9H583 2144 aaKnown RBP4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 SORL1Q92673 2214 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 ZFP92A6NM28 416 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 DNASE2O00115 360 aaPredicted RBP4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 OR5G3P0C626 314 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 RPL31P62899 125 aaKnown RBP4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 HBG1P69891 147 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 HBG2P69892 147 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 SMIM12Q96EX1 92 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 TMEM68Q96MH6 324 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 C1QTNF6Q9BXI9 259 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 CLEC7AQ9BXN2 247 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 BEX4Q9NWD9 120 aaPredicted RBP4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 ANK3Q12955 4377 aaKnown RBP4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 ARFGEF3Q5TH69 2177 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 SMCO3A2RU48 225 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 UBE2E1P51965 193 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 CFHR3Q02985 330 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 C1QL4Q86Z23 238 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 KCNIP2Q9NS61 270 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 TCF19Q9Y242 345 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 DMRT1Q9Y5R6 373 aa4.3□□□□□ -1.72
PRPF4B-201ENST00000337659 IGHV1-3A0A0C4DH29 117 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 A0A1W2PN81 502 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 YIF1AO95070 293 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 ZNF205O95201 554 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 CHRNA7P36544 502 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 ICAM4Q14773 271 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 PRAMEF5Q5TYX0 476 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 TTC9CQ8N5M4 171 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 OR8B3Q8NGG8 313 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 LINC00052Q96N35 136 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 OR8B2Q96RD0 313 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 PYGO2Q9BRQ0 406 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 NPCDR1Q9BY65 106 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 PSENENQ9NZ42 101 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 INSIG2Q9Y5U4 225 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 TRBV9A0A0B4J1U6 114 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 HBE1P02100 147 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 TFF1P04155 84 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 IL3RAP26951 378 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 RND2P52198 227 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 RTL8BQ17RB0 113 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 TM4SF20Q53R12 229 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 RPL39P5Q59GN2 51 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 WDR73Q6P4I2 378 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 TREML4Q6UXN2 200 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 TMEM144Q7Z5S9 345 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 RNF152Q8N8N0 203 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 OR1L6Q8NGR2 347 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 S1PR3Q99500 378 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 OR51B6Q9H340 312 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 FAM96BQ9Y3D0 163 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 SPG11Q96JI7 2443 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 MED12Q93074 2177 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 TMEM89A2RUT3 159 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms