RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 KLK2P20151 261 aa6.2□□□□□ -1.42
EPHA3-201ENST00000336596 CRYBB2P43320 205 aa6.2□□□□□ -1.42
EPHA3-201ENST00000336596 TWIST1Q15672 202 aa6.2□□□□□ -1.42
EPHA3-201ENST00000336596 SGK494Q96LW2 274 aa6.2□□□□□ -1.42
EPHA3-201ENST00000336596 YPEL2Q96QA6 119 aa6.2□□□□□ -1.42
EPHA3-201ENST00000336596 SRSF8Q9BRL6 282 aaKnown RBP6.2□□□□□ -1.42
EPHA3-201ENST00000336596 HSPB7Q9UBY9 170 aa6.2□□□□□ -1.42
EPHA3-201ENST00000336596 TNFSF13O75888 250 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 LRRC75AQ8NAA5 344 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 OR10AC1Q8NH08 325 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 TRAV9-2A0A087WT02 112 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 MELTFP08582 738 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 OR9G9P0C7N8 305 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 Q0VFX4 171 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 RNASEKQ6P5S7 137 aaKnown RBP6.19□□□□□ -1.42
EPHA3-201ENST00000336596 NCCRP1Q6ZVX7 275 aaPredicted RBP6.19□□□□□ -1.42
EPHA3-201ENST00000336596 LRRTM1Q86UE6 522 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 GTF3AQ92664 365 aaKnown RBP6.19□□□□□ -1.42
EPHA3-201ENST00000336596 Q96M66 194 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 ZNF488Q96MN9 340 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 TMEM191AQ9H0A3 160 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 TRBV7-1A0A0A6YYK4 115 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 LY6G6EA0A0G2JKS1 128 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 CLDN34H7C241 214 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 J3KRW8 73 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 SIGLEC5O15389 551 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 PRSS1P07477 247 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 M6PRP20645 277 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 BATFQ16520 125 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 U3KQA8 63 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 PCP4L1A6NKN8 68 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 HMSDA8MTL9 139 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 GCGP01275 180 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 C8orf88P0DMB2 117 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 ZNF56Q15929 161 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 TMEM255AQ5JRV8 349 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 CLEC18BQ6UXF7 455 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 VMO1Q7Z5L0 202 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 NUDT10Q8NFP7 164 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 GATAD1Q8WUU5 269 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 MDC1Q14676 2089 aaKnown RBP6.19□□□□□ -1.42
EPHA3-201ENST00000336596 A0A1B0GTI1 187 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 PCNX2A6NKB5 2137 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 FAM157CP0CG43 387 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 ZNF154Q13106 437 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 KLK11Q9UBX7 282 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 WSB1Q9Y6I7 421 aa6.19□□□□□ -1.42
EPHA3-201ENST00000336596 CACNA1GO43497 2377 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 COL6A6A6NMZ7 2263 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 CBY3A6NI87 242 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 TCF15Q12870 199 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 FOXL1Q12952 345 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 UNC119Q13432 240 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 KIAA0141Q14154 515 aaPredicted RBP6.18□□□□□ -1.42
EPHA3-201ENST00000336596 KIR3DL3Q8N743 410 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 OR51M1Q9H341 326 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 GSX1Q9H4S2 264 aaPredicted RBP6.18□□□□□ -1.42
EPHA3-201ENST00000336596 MYLKQ15746 1914 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 TMEM238LA0A1B0GVL6 79 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 A6NJY4 79 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 MPC2O95563 127 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 RND3P61587 244 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 RAB32Q13637 225 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 ASPHD2Q6ICH7 369 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 ALX4Q9H161 411 aaPredicted RBP6.18□□□□□ -1.42
EPHA3-201ENST00000336596 CRIM1Q9NZV1 1036 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 KLHDC2Q9Y2U9 406 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 PGLYRP1O75594 196 aaPredicted RBP6.18□□□□□ -1.42
EPHA3-201ENST00000336596 EWSR1Q01844 656 aaKnown RBP eCLIP6.18□□□□□ -1.42
EPHA3-201ENST00000336596 OR5H6Q8NGV6 325 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 SMIM8Q96KF7 97 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 REPIN1Q9BWE0 567 aaKnown RBP6.18□□□□□ -1.42
EPHA3-201ENST00000336596 SLC35B3Q9H1N7 401 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 RBKSQ9H477 322 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 DEPPQ9NTK1 212 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 DNAJC13O75165 2243 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 MARCH11A6NNE9 402 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 MT-ND6P03923 174 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 CCKARP32238 428 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 CDX1P47902 265 aaPredicted RBP6.18□□□□□ -1.42
EPHA3-201ENST00000336596 ELOBQ15370 118 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 SNAI3Q3KNW1 292 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 PSMG4Q5JS54 123 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 Q6AWC8 147 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 HCP5Q6MZN7 132 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 HIST1H2BAQ96A08 127 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 GSX2Q9BZM3 304 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 MAP1LC3AQ9H492 121 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 SLC25A15Q9Y619 301 aa6.18□□□□□ -1.42
EPHA3-201ENST00000336596 TRAV14DV4A0A0A6YYC5 116 aa6.17□□□□□ -1.42
EPHA3-201ENST00000336596 RBFOX2O43251 390 aaKnown RBP eCLIP6.17□□□□□ -1.42
EPHA3-201ENST00000336596 PSCAO43653 123 aa6.17□□□□□ -1.42
EPHA3-201ENST00000336596 RAMP1O60894 148 aa6.17□□□□□ -1.42
EPHA3-201ENST00000336596 PTBP3O95758 552 aaKnown RBP6.17□□□□□ -1.42
EPHA3-201ENST00000336596 C11orf42Q8N5U0 333 aa6.17□□□□□ -1.42
EPHA3-201ENST00000336596 OR11H4Q8NGC9 324 aa6.17□□□□□ -1.42
EPHA3-201ENST00000336596 ANGPTL6Q8NI99 470 aa6.17□□□□□ -1.42
EPHA3-201ENST00000336596 COX6CP09669 75 aa6.17□□□□□ -1.42
EPHA3-201ENST00000336596 CACNG7P62955 275 aa6.17□□□□□ -1.42
EPHA3-201ENST00000336596 SRSF6Q13247 344 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms