RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CSN3P07498 182 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 STAG3L2P0CL84 134 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 MIC13Q5XKP0 118 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 LRTM2Q8N967 370 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 RTBDNQ9BSG5 229 aaPredicted RBP9.59□□□□□ -0.87
COL4A5-201ENST00000328300 CNTRLQ7Z7A1 2325 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 VENTXO95231 258 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 COL5A1-AS1Q5SY13 56 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 ZNF418Q8TF45 676 aaPredicted RBP9.59□□□□□ -0.87
COL4A5-201ENST00000328300 SPOCK3Q9BQ16 436 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 UFC1Q9Y3C8 167 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 PTPRDP23468 1912 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 TRBV9A0A0B4J1U6 114 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 LY6G6EA0A0G2JKS1 128 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 H0YL77 283 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 K7ENP7 123 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 IGHV1-46P01743 117 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 APCSP02743 223 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 PRSS1P07477 247 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 DLX6P56179 175 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 RUNX1Q01196 453 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 GUCA2BQ16661 112 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 PLPPR1Q8TBJ4 325 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 VN1R17PQ8TDU5 208 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 NABP2Q9BQ15 211 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 U3KQA8 63 aa9.59□□□□□ -0.87
COL4A5-201ENST00000328300 ERVH48-1M5A8F1 160 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 ARPC1AQ92747 370 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 HLA-DQA1P01909 254 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 SNRPD3P62318 126 aaKnown RBP9.58□□□□□ -0.88
COL4A5-201ENST00000328300 ZNF738Q8NE65 137 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 OR52E5Q8NH55 327 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 TBX15Q96SF7 602 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 RSG1Q9BU20 258 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 UPK2O00526 184 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 NBR2O15453 112 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 CA2P00918 260 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 HERPUD1Q15011 391 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 RPL39P5Q59GN2 51 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 K7ERU9 68 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 FAM71F2Q6NXP2 309 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 Q6ZS49 121 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 PPP1R27Q86WC6 154 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 TMEM116Q8NCL8 245 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 OR2D3Q8NGH3 330 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 DCTN5Q9BTE1 182 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 C18orf12Q96KH6 178 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 NPFFR1Q9GZQ6 430 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 CABIN1Q9Y6J0 2220 aa9.58□□□□□ -0.88
COL4A5-201ENST00000328300 OTX1P32242 354 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-201ENST00000328300 MINOS1Q5TGZ0 78 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 MINOS1-NBL1R4GNA1 71 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 CFPP27918 469 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 MORN2Q502X0 79 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 SPANXN1Q5VSR9 72 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 MRPL54Q6P161 138 aaKnown RBP9.57□□□□□ -0.88
COL4A5-201ENST00000328300 PRNTQ86SH4 94 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 ATG101Q9BSB4 218 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 HSPB7Q9UBY9 170 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 C5orf52A6NGY3 159 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 SNURFLB1AK76 121 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 IER3P46695 156 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 OR4X2Q8NGF9 303 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 PGPA6NDG6 321 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 IBA57Q5T440 356 aaKnown RBP9.57□□□□□ -0.88
COL4A5-201ENST00000328300 CENPVQ7Z7K6 275 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-201ENST00000328300 PIP4P1Q86T03 277 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 PUSL1Q8N0Z8 303 aaKnown RBP9.57□□□□□ -0.88
COL4A5-201ENST00000328300 NUP210Q8TEM1 1887 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-201ENST00000328300 TRAV24A0A0B4J272 114 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 PSMB2P49721 201 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 ZNF506Q5JVG8 444 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 PVRIGQ6DKI7 326 aa9.57□□□□□ -0.88
COL4A5-201ENST00000328300 DIRC3C9JPN6 131 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 FCGR2BP31994 310 aaPredicted RBP9.56□□□□□ -0.88
COL4A5-201ENST00000328300 PNRC2Q9NPJ4 139 aaKnown RBP9.56□□□□□ -0.88
COL4A5-201ENST00000328300 MRPL20Q9BYC9 149 aaKnown RBP9.56□□□□□ -0.88
COL4A5-201ENST00000328300 TRIOBPQ9H2D6 2365 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 M0R1W7 72 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 IFITM2Q01629 132 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 C7orf69Q9H7B7 122 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 WDR81Q562E7 1941 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 TDRD6O60522 2096 aaKnown RBP9.56□□□□□ -0.88
COL4A5-201ENST00000328300 C15orf61A6NNL5 157 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 LDLRAD4O15165 306 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 IGKV1D-33P01593 117 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 IGKV1-33P01594 117 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 CYB561D1Q8N8Q1 229 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 C21orf62Q9NYP8 219 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 PLXNA4Q9HCM2 1894 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.56□□□□□ -0.88
COL4A5-201ENST00000328300 TRGV3P03979 118 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 IL6RP08887 468 aaPredicted RBP9.56□□□□□ -0.88
COL4A5-201ENST00000328300 NPCDR1Q9BY65 106 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 NCOR1P1Q9H4R4 102 aa9.56□□□□□ -0.88
COL4A5-201ENST00000328300 C17orf98A8MV24 154 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 GCHFRP30047 84 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 LCN2P80188 198 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 LINC00518Q8N0U6 118 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 NPIPB3Q92617 1050 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms