RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 FANCD2OSQ96PS1 177 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 SRSF8Q9BRL6 282 aaKnown RBP13.49□□□□□ -0.25
TPM1-203ENST00000317516 ZNF2Q9BSG1 426 aaPredicted RBP13.49□□□□□ -0.25
TPM1-203ENST00000317516 THYN1Q9P016 225 aa13.49□□□□□ -0.25
TPM1-203ENST00000317516 STAB2Q8WWQ8 2551 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 A0A1B0GW64 132 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 PPP5D1E7EU14 171 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 LGALS9O00182 355 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 UPK2O00526 184 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 NDUFB8O95169 186 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 OR2C1O95371 312 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 PMP2P02689 132 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 ARL3P36405 182 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 KLK9Q2XQG4 91 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 LAX1Q8IWV1 398 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 MUC7Q8TAX7 377 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 MOB3AQ96BX8 217 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 CMTM3Q96MX0 182 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 TM2D3Q9BRN9 247 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 TECRQ9NZ01 308 aaKnown RBP13.48□□□□□ -0.25
TPM1-203ENST00000317516 COMMD9Q9P000 198 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 KLK9Q9UKQ9 250 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 ANAPC10Q9UM13 185 aa13.48□□□□□ -0.25
TPM1-203ENST00000317516 TRBV7-1A0A0A6YYK4 115 aa13.47□□□□□ -0.25
TPM1-203ENST00000317516 PGLYRP1O75594 196 aaPredicted RBP13.47□□□□□ -0.25
TPM1-203ENST00000317516 NAT1P18440 290 aa13.47□□□□□ -0.25
TPM1-203ENST00000317516 F2RP25116 425 aa13.47□□□□□ -0.25
TPM1-203ENST00000317516 S100GP29377 79 aa13.47□□□□□ -0.25
TPM1-203ENST00000317516 OR2B8PP59922 312 aa13.47□□□□□ -0.25
TPM1-203ENST00000317516 THOC7Q6I9Y2 204 aaKnown RBP13.47□□□□□ -0.25
TPM1-203ENST00000317516 CLEC19AQ6UXS0 136 aa13.47□□□□□ -0.25
TPM1-203ENST00000317516 TMEM140Q9NV12 185 aa13.47□□□□□ -0.25
TPM1-203ENST00000317516 SLC2A8Q9NY64 477 aa13.47□□□□□ -0.25
TPM1-203ENST00000317516 COMMD3Q9UBI1 195 aa13.47□□□□□ -0.25
TPM1-203ENST00000317516 DMRT1Q9Y5R6 373 aa13.47□□□□□ -0.25
TPM1-203ENST00000317516 IGHV3-23P01764 117 aa13.46□□□□□ -0.25
TPM1-203ENST00000317516 HLA-AP01891 365 aaKnown RBP13.46□□□□□ -0.25
TPM1-203ENST00000317516 REG1AP05451 166 aa13.46□□□□□ -0.25
TPM1-203ENST00000317516 FOLR2P14207 255 aa13.46□□□□□ -0.25
TPM1-203ENST00000317516 DEFB114Q30KQ6 69 aa13.46□□□□□ -0.25
TPM1-203ENST00000317516 CD300EQ496F6 205 aaPredicted RBP13.46□□□□□ -0.25
TPM1-203ENST00000317516 LPCAT3Q6P1A2 487 aa13.46□□□□□ -0.25
TPM1-203ENST00000317516 C19orf35Q6ZS72 473 aa13.46□□□□□ -0.25
TPM1-203ENST00000317516 HSD17B13Q7Z5P4 300 aaPredicted RBP13.46□□□□□ -0.25
TPM1-203ENST00000317516 THAP7Q9BT49 309 aaPredicted RBP13.46□□□□□ -0.25
TPM1-203ENST00000317516 FUNDC2Q9BWH2 189 aa13.46□□□□□ -0.25
TPM1-203ENST00000317516 QTRT1Q9BXR0 403 aaKnown RBP13.46□□□□□ -0.25
TPM1-203ENST00000317516 IGLV11-55A0A075B6I3 123 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 ZNF320A2RRD8 509 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 IZUMO1RA6ND01 250 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 C2orf70A6NJV1 201 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 TPPPO94811 219 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 S1PR2O95136 353 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 APOA1P02647 267 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 CLEC3BP05452 202 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 MYOD1P15172 320 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 TSPAN5P62079 268 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 DGCR14Q96DF8 476 aaKnown RBP13.45□□□□□ -0.26
TPM1-203ENST00000317516 CCDC140Q96MF4 163 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 CITED4Q96RK1 184 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 SPATA25Q9BR10 227 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 SCPEP1Q9HB40 452 aa13.45□□□□□ -0.26
TPM1-203ENST00000317516 TRAV3A0A0B4J244 114 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 IGLC7A0M8Q6 106 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 CGB1A6NKQ9 187 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 GPR31O00270 319 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 SNAPC5O75971 98 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 RLN1P04808 185 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 TRAPPC2P0DI81 140 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 TRAPPC2BP0DI82 140 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 HLA-DMAP28067 261 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 HRH1P35367 487 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 CD81P60033 236 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 ADAMTSL5Q6ZMM2 481 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 LYSMD2Q8IV50 215 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 CADM3Q8N126 398 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 OR1L8Q8NGR8 309 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 GPX8Q8TED1 209 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 S4R3C0 116 aa13.44□□□□□ -0.26
TPM1-203ENST00000317516 MARCH11A6NNE9 402 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 KRASP01116 189 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 IFNA6P05013 189 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 EIF4EP06730 217 aaKnown RBP13.43□□□□□ -0.26
TPM1-203ENST00000317516 LYL1P12980 280 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 RPA2P15927 270 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 CBLN1P23435 193 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 PTBP1P26599 531 aaKnown RBP eCLIP13.43□□□□□ -0.265e-7■■■□□ 15.6
TPM1-203ENST00000317516 LPAR6P43657 344 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 RORCP51449 518 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 VBP1P61758 197 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 NCS1P62166 190 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 GUCA2BQ16661 112 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 HAGHQ16775 308 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 FCAMRQ8WWV6 532 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 NEURL2Q9BR09 285 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 PALMDQ9NP74 551 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 FKBP11Q9NYL4 201 aa13.43□□□□□ -0.26
TPM1-203ENST00000317516 TEX50A0A1B0GTY4 177 aa13.42□□□□□ -0.26
TPM1-203ENST00000317516 ZNF785A8K8V0 405 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms