RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 MBD3L1Q8WWY6 194 aa18.79■□□□□ 0.6
RAB40B-201ENST00000269347 PINX1Q96BK5 328 aaKnown RBP18.79■□□□□ 0.6
RAB40B-201ENST00000269347 C19orf84I3L1E1 186 aa18.79■□□□□ 0.6
RAB40B-201ENST00000269347 HBE1P02100 147 aa18.79■□□□□ 0.6
RAB40B-201ENST00000269347 GNLYP22749 145 aa18.79■□□□□ 0.6
RAB40B-201ENST00000269347 HOXA1P49639 335 aaPredicted RBP18.79■□□□□ 0.6
RAB40B-201ENST00000269347 OR5AN1Q8NGI8 311 aa18.79■□□□□ 0.6
RAB40B-201ENST00000269347 NABP2Q9BQ15 211 aa18.79■□□□□ 0.6
RAB40B-201ENST00000269347 TMPRSS5Q9H3S3 457 aa18.79■□□□□ 0.6
RAB40B-201ENST00000269347 ZFHX3Q15911 3703 aa18.79■□□□□ 0.6
RAB40B-201ENST00000269347 MED13LQ71F56 2210 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 ACACBO00763 2458 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 TRAV1-1A0A0B4J248 108 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 UPK2O00526 184 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 HSPE1P61604 102 aaKnown RBP18.78■□□□□ 0.6
RAB40B-201ENST00000269347 ATP6V1FQ16864 119 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 HINT2Q9BX68 163 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 OR51B2Q9Y5P1 312 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 NDUFA2O43678 99 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 PPOXP50336 477 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 RHEBQ15382 184 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 ZNF787Q6DD87 383 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 OR10X1Q8NGY0 326 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 SLC25A22Q9H936 323 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 GNG13Q9P2W3 67 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 TIMM9Q9Y5J7 89 aa18.78■□□□□ 0.6
RAB40B-201ENST00000269347 A0A087X0M5 115 aa18.77■□□□□ 0.6
RAB40B-201ENST00000269347 A0A1B0GX30 115 aa18.77■□□□□ 0.6
RAB40B-201ENST00000269347 ZNF506Q5JVG8 444 aa18.77■□□□□ 0.6
RAB40B-201ENST00000269347 FAM122AQ96E09 287 aa18.77■□□□□ 0.6
RAB40B-201ENST00000269347 SPTAN1Q13813 2472 aaKnown RBP18.77■□□□□ 0.6
RAB40B-201ENST00000269347 CD1BP29016 333 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 TREML4Q6UXN2 200 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 LINC00311Q8N616 119 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 CYB561D1Q8N8Q1 229 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 OR10W1Q8NGF6 305 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 UNKLQ9H9P5 680 aaKnown RBP18.76■□□□□ 0.59
RAB40B-201ENST00000269347 WDR83OSQ9Y284 106 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 IGHV3-72A0A0B4J1Y9 119 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 TEX50A0A1B0GTY4 177 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 LOC102723971A0A1B0GUV8 181 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 ZFP92A6NM28 416 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 NDUFS7O75251 213 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 CA2P00918 260 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 HRASP01112 189 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 FOLR2P14207 255 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 RTL8BQ17RB0 113 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 ARSJQ5FYB0 599 aaPredicted RBP18.76■□□□□ 0.59
RAB40B-201ENST00000269347 FFAR4Q5NUL3 377 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 MOB3BQ86TA1 216 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 ZFP82Q8N141 532 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 ITLN2Q8WWU7 325 aaPredicted RBP18.76■□□□□ 0.59
RAB40B-201ENST00000269347 HIST1H2BAQ96A08 127 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 TUBA4BQ9H853 241 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 BIN3Q9NQY0 253 aa18.76■□□□□ 0.59
RAB40B-201ENST00000269347 PUS1Q9Y606 427 aaKnown RBP eCLIP18.76■□□□□ 0.59
RAB40B-201ENST00000269347 CEBPGP53567 150 aa18.75■□□□□ 0.59
RAB40B-201ENST00000269347 GATAD1Q8WUU5 269 aa18.75■□□□□ 0.59
RAB40B-201ENST00000269347 IGFBPL1Q8WX77 278 aa18.75■□□□□ 0.59
RAB40B-201ENST00000269347 HARBI1Q96MB7 349 aa18.75■□□□□ 0.59
RAB40B-201ENST00000269347 CBLN4Q9NTU7 201 aa18.75■□□□□ 0.59
RAB40B-201ENST00000269347 FLNCQ14315 2725 aa18.75■□□□□ 0.59
RAB40B-201ENST00000269347 MAP1LC3B2A6NCE7 125 aa18.75■□□□□ 0.59
RAB40B-201ENST00000269347 C2CD4CQ8TF44 421 aa18.75■□□□□ 0.59
RAB40B-201ENST00000269347 MAP1LC3BQ9GZQ8 125 aa18.75■□□□□ 0.59
RAB40B-201ENST00000269347 TMEM133Q9H2Q1 129 aa18.75■□□□□ 0.59
RAB40B-201ENST00000269347 TPSG1Q9NRR2 321 aa18.75■□□□□ 0.59
RAB40B-201ENST00000269347 SMCO3A2RU48 225 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 C22orf46C9J442 243 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 IGLV2-23P01705 113 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 MRGPRG-AS1Q2M3A8 158 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 ISOC2Q96AB3 205 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 MGST2Q99735 147 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 CGB1A6NKQ9 187 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 KBTBD11O94819 623 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 MT-ND4LP03901 98 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 C10orf55Q5SWW7 151 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 LDLRAD2Q5SZI1 272 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 OR9G1Q8NH87 305 aa18.74■□□□□ 0.59
RAB40B-201ENST00000269347 KLF2Q9Y5W3 355 aaPredicted RBP18.74■□□□□ 0.59
RAB40B-201ENST00000269347 A0A1W2PPH5 198 aa18.73■□□□□ 0.59
RAB40B-201ENST00000269347 HSPB1P04792 205 aaKnown RBP18.73■□□□□ 0.59
RAB40B-201ENST00000269347 MLANAQ16655 118 aa18.73■□□□□ 0.59
RAB40B-201ENST00000269347 TMEM177Q53S58 311 aa18.73■□□□□ 0.59
RAB40B-201ENST00000269347 SLC24A4Q8NFF2 622 aa18.73■□□□□ 0.59
RAB40B-201ENST00000269347 OR10G4Q8NGN3 311 aa18.73■□□□□ 0.59
RAB40B-201ENST00000269347 OR10G9Q8NGN4 311 aa18.73■□□□□ 0.59
RAB40B-201ENST00000269347 OR10G7Q8NGN6 311 aa18.73■□□□□ 0.59
RAB40B-201ENST00000269347 BET1LQ9NYM9 111 aa18.73■□□□□ 0.59
RAB40B-201ENST00000269347 IGHV2-26A0A0B4J1V2 119 aa18.72■□□□□ 0.59
RAB40B-201ENST00000269347 YIF1AO95070 293 aa18.72■□□□□ 0.59
RAB40B-201ENST00000269347 ZNF137PP52743 207 aa18.72■□□□□ 0.59
RAB40B-201ENST00000269347 RAB5BP61020 215 aa18.72■□□□□ 0.59
RAB40B-201ENST00000269347 WDR25Q64LD2 544 aaPredicted RBP18.72■□□□□ 0.59
RAB40B-201ENST00000269347 C8orf31Q8N9H6 132 aa18.72■□□□□ 0.59
RAB40B-201ENST00000269347 IFNA4P05014 189 aa18.72■□□□□ 0.59
RAB40B-201ENST00000269347 NPY1RP25929 384 aa18.72■□□□□ 0.59
RAB40B-201ENST00000269347 CDKN1AP38936 164 aa18.72■□□□□ 0.59
RAB40B-201ENST00000269347 PRCDQ00LT1 54 aa18.72■□□□□ 0.59
RAB40B-201ENST00000269347 IGLV1-47P01700 117 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms