RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 NBPF19A0A087WUL8 3843 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 MAP1LC3B2A6NCE7 125 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 SRRM4A7MD48 611 aaKnown RBP13.78□□□□□ -0.2
CHKA-201ENST00000265689 HSPB1P04792 205 aaKnown RBP13.78□□□□□ -0.2
CHKA-201ENST00000265689 MDKP21741 143 aaPredicted RBP13.78□□□□□ -0.2
CHKA-201ENST00000265689 FFAR4Q5NUL3 377 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 MUC15Q8N387 334 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 MRPL20Q9BYC9 149 aaKnown RBP13.78□□□□□ -0.2
CHKA-201ENST00000265689 MAP1LC3BQ9GZQ8 125 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 TMEM14BQ9NUH8 114 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 HMGB3O15347 200 aaKnown RBP13.78□□□□□ -0.2
CHKA-201ENST00000265689 HRASP01112 189 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 RPP30P78346 268 aaKnown RBP13.78□□□□□ -0.2
CHKA-201ENST00000265689 ZNF833PQ6ZTB9 187 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 SLC25A22Q9H936 323 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 SMCO4Q9NRQ5 59 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 SLC39A9Q9NUM3 307 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 KAAG1Q9UBP8 84 aa13.78□□□□□ -0.2
CHKA-201ENST00000265689 FOXA2Q9Y261 457 aaPredicted RBP13.78□□□□□ -0.2
CHKA-201ENST00000265689 FAM208BQ5VWN6 2430 aa13.77□□□□□ -0.2
CHKA-201ENST00000265689 COL8A2P25067 703 aa13.77□□□□□ -0.21
CHKA-201ENST00000265689 CD1BP29016 333 aa13.77□□□□□ -0.21
CHKA-201ENST00000265689 REG1BP48304 166 aa13.77□□□□□ -0.21
CHKA-201ENST00000265689 RTL8BQ17RB0 113 aa13.77□□□□□ -0.21
CHKA-201ENST00000265689 KHDC3LQ587J8 217 aa13.77□□□□□ -0.21
CHKA-201ENST00000265689 LY86O95711 162 aa13.77□□□□□ -0.21
CHKA-201ENST00000265689 HSPE1P61604 102 aaKnown RBP13.77□□□□□ -0.21
CHKA-201ENST00000265689 POU2AF1Q16633 256 aa13.77□□□□□ -0.21
CHKA-201ENST00000265689 ZNF709Q8N972 641 aa13.77□□□□□ -0.21
CHKA-201ENST00000265689 SMCO3A2RU48 225 aa13.76□□□□□ -0.21
CHKA-201ENST00000265689 ZNF672Q499Z4 452 aaPredicted RBP13.76□□□□□ -0.21
CHKA-201ENST00000265689 OR10G4Q8NGN3 311 aa13.76□□□□□ -0.21
CHKA-201ENST00000265689 OR10G9Q8NGN4 311 aa13.76□□□□□ -0.21
CHKA-201ENST00000265689 OR10G7Q8NGN6 311 aa13.76□□□□□ -0.21
CHKA-201ENST00000265689 LHX4Q969G2 390 aa13.76□□□□□ -0.21
CHKA-201ENST00000265689 HINT2Q9BX68 163 aa13.76□□□□□ -0.21
CHKA-201ENST00000265689 WDR83OSQ9Y284 106 aa13.76□□□□□ -0.21
CHKA-201ENST00000265689 SPG11Q96JI7 2443 aa13.76□□□□□ -0.21
CHKA-201ENST00000265689 PRSS46E5RG02 174 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 BCL2P10415 239 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 DEFA4P12838 97 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 DLX6P56179 175 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 DIAPH2-AS1Q14236 149 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 HABP2Q14520 560 aaPredicted RBP13.75□□□□□ -0.21
CHKA-201ENST00000265689 Q8N7P7 452 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 OR51B2Q9Y5P1 312 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 MED13LQ71F56 2210 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 H3BQ15 152 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 OPN1MWP04001 364 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 IFNA4P05014 189 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 OPN1MW2P0DN77 364 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 OPN1MW3P0DN78 364 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 SNRPEP62304 92 aaKnown RBP13.75□□□□□ -0.21
CHKA-201ENST00000265689 CTAG1AP78358 180 aa13.75□□□□□ -0.21
CHKA-201ENST00000265689 UPK2O00526 184 aa13.74□□□□□ -0.21
CHKA-201ENST00000265689 IL6RP08887 468 aaPredicted RBP13.74□□□□□ -0.21
CHKA-201ENST00000265689 TMEM155Q4W5P6 130 aa13.74□□□□□ -0.21
CHKA-201ENST00000265689 OR10X1Q8NGY0 326 aa13.74□□□□□ -0.21
CHKA-201ENST00000265689 ISOC2Q96AB3 205 aa13.74□□□□□ -0.21
CHKA-201ENST00000265689 TMPRSS5Q9H3S3 457 aa13.74□□□□□ -0.21
CHKA-201ENST00000265689 UNKLQ9H9P5 680 aaKnown RBP13.74□□□□□ -0.21
CHKA-201ENST00000265689 J3QR06 171 aa13.74□□□□□ -0.21
CHKA-201ENST00000265689 MEOX2P50222 304 aa13.74□□□□□ -0.21
CHKA-201ENST00000265689 C17orf112F2Z3M2 114 aa13.73□□□□□ -0.21
CHKA-201ENST00000265689 H0YJW9 148 aa13.73□□□□□ -0.21
CHKA-201ENST00000265689 MBP02144 154 aa13.73□□□□□ -0.21
CHKA-201ENST00000265689 SAA1P0DJI8 122 aaPredicted RBP13.73□□□□□ -0.21
CHKA-201ENST00000265689 TREML4Q6UXN2 200 aa13.73□□□□□ -0.21
CHKA-201ENST00000265689 PRNDQ9UKY0 176 aa13.73□□□□□ -0.21
CHKA-201ENST00000265689 CTXND1A0A1B0GTU2 59 aa13.73□□□□□ -0.21
CHKA-201ENST00000265689 RAB11AP62491 216 aa13.73□□□□□ -0.21
CHKA-201ENST00000265689 RHEBQ15382 184 aa13.73□□□□□ -0.21
CHKA-201ENST00000265689 GCSAMLQ5JQS6 135 aa13.73□□□□□ -0.21
CHKA-201ENST00000265689 ENY2Q9NPA8 101 aa13.73□□□□□ -0.21
CHKA-201ENST00000265689 C19orf84I3L1E1 186 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 CA2P00918 260 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 APOA2P02652 100 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 RNF224P0DH78 156 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 NPY1RP25929 384 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 DLX1P56177 255 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 C11orf42Q8N5U0 333 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 SLC24A4Q8NFF2 622 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 RAB24Q969Q5 203 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 HIST1H2BAQ96A08 127 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 RAB39BQ96DA2 213 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 A0A1W2PPE2 198 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 LY6HO94772 140 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 DLK1P80370 383 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 OR5AN1Q8NGI8 311 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 HARBI1Q96MB7 349 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 ACTR3CQ9C0K3 210 aaPredicted RBP13.72□□□□□ -0.21
CHKA-201ENST00000265689 TENM4Q6N022 2769 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 TNCP24821 2201 aa13.72□□□□□ -0.21
CHKA-201ENST00000265689 KBTBD11O94819 623 aa13.71□□□□□ -0.21
CHKA-201ENST00000265689 IGHV1-8P0DP01 117 aa13.71□□□□□ -0.21
CHKA-201ENST00000265689 PRB3Q04118 309 aaPredicted RBP13.71□□□□□ -0.21
CHKA-201ENST00000265689 FAM90A2PQ658T7 463 aa13.71□□□□□ -0.21
CHKA-201ENST00000265689 RBMS3Q6XE24 437 aaKnown RBP13.71□□□□□ -0.21
CHKA-201ENST00000265689 C15orf54Q8N8G6 183 aa13.71□□□□□ -0.21
CHKA-201ENST00000265689 MGST2Q99735 147 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms