RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 ETV3LQ6ZN32 361 aa12.77□□□□□ -0.36
VPS26A-201ENST00000263559 BPESC1Q9GZL8 116 aa12.77□□□□□ -0.36
VPS26A-201ENST00000263559 INSIG2Q9Y5U4 225 aa12.77□□□□□ -0.36
VPS26A-201ENST00000263559 EPG5Q9HCE0 2579 aa12.77□□□□□ -0.36
VPS26A-201ENST00000263559 IGHV1-3A0A0C4DH29 117 aa12.77□□□□□ -0.37
VPS26A-201ENST00000263559 PRCDQ00LT1 54 aa12.77□□□□□ -0.37
VPS26A-201ENST00000263559 VWC2Q2TAL6 325 aa12.77□□□□□ -0.37
VPS26A-201ENST00000263559 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.37
VPS26A-201ENST00000263559 VSIRQ9H7M9 311 aa12.77□□□□□ -0.37
VPS26A-201ENST00000263559 ENY2Q9NPA8 101 aa12.77□□□□□ -0.37
VPS26A-201ENST00000263559 FKBP11Q9NYL4 201 aa12.77□□□□□ -0.37
VPS26A-201ENST00000263559 A0A1B0GV50 99 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 TMEM218A2RU14 115 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 LY6LH3BQJ8 138 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 SNCAP37840 140 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 LDLRAD2Q5SZI1 272 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 TREM1Q9NP99 234 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 AMMECR1Q9Y4X0 333 aaPredicted RBP12.76□□□□□ -0.37
VPS26A-201ENST00000263559 SCO1O75880 301 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 MOB3BQ86TA1 216 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 OR11H6Q8NGC7 330 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 TMEM167AQ8TBQ9 72 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 RPEQ96AT9 228 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 PLEKHA3Q9HB20 300 aa12.76□□□□□ -0.37
VPS26A-201ENST00000263559 PRSS46E5RG02 174 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 RNASEK-C17orf49H0YIS7 233 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 FGF7P21781 194 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 USF1P22415 310 aaPredicted RBP12.75□□□□□ -0.37
VPS26A-201ENST00000263559 PRTN3P24158 256 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 RPL8P62917 257 aaKnown RBP12.75□□□□□ -0.37
VPS26A-201ENST00000263559 KLRD1Q13241 179 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 SLC24A4Q8NFF2 622 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 OR5B3Q8NH48 314 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 VSTM2AQ8TAG5 236 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 CCL19Q99731 98 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 SCAF4O95104 1147 aaKnown RBP12.75□□□□□ -0.37
VPS26A-201ENST00000263559 IFNA4P05014 189 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 H2AFB1P0C5Y9 115 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 MDKP21741 143 aaPredicted RBP12.75□□□□□ -0.37
VPS26A-201ENST00000263559 RAB11AP62491 216 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 LCN2P80188 198 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 SERF2P84101 59 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 SRSF1Q07955 248 aaKnown RBP eCLIP12.75□□□□□ -0.37
VPS26A-201ENST00000263559 HCP5Q6MZN7 132 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 SPSB3Q6PJ21 355 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 RPRMQ9NS64 109 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 SLC25A17O43808 307 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 CA2P00918 260 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 APOC3P02656 99 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 CD5P06127 495 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 NPY1RP25929 384 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 CD1BP29016 333 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 LGALS7P47929 136 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 LMO4P61968 165 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 DPPA3Q6W0C5 159 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 CENPVQ7Z7K6 275 aaPredicted RBP12.75□□□□□ -0.37
VPS26A-201ENST00000263559 OR4A5Q8NH83 315 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 CLDND2Q8NHS1 167 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 COMMD5Q9GZQ3 224 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 TIMM9Q9Y5J7 89 aa12.75□□□□□ -0.37
VPS26A-201ENST00000263559 MED13LQ71F56 2210 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 E7EUB6 86 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 CCL20P78556 96 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 C1orf122Q6ZSJ8 110 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 COMMD1Q8N668 190 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 OR10W1Q8NGF6 305 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 SCRT1Q9BWW7 348 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 ASH1LQ9NR48 2969 aaKnown RBP12.74□□□□□ -0.37
VPS26A-201ENST00000263559 ADCYAP1P18509 176 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 HTR1DP28221 377 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 DVL1P1P54792 670 aaPredicted RBP12.74□□□□□ -0.37
VPS26A-201ENST00000263559 PAX2Q02962 417 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 VMA21Q3ZAQ7 101 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 ZNF430Q9H8G1 570 aaPredicted RBP12.74□□□□□ -0.37
VPS26A-201ENST00000263559 TPSG1Q9NRR2 321 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 NDUFA4L2Q9NRX3 87 aa12.74□□□□□ -0.37
VPS26A-201ENST00000263559 WNK2Q9Y3S1 2297 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 C9JQL5 133 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 CNTFRP26992 372 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 ELLP55199 621 aaPredicted RBP12.73□□□□□ -0.37
VPS26A-201ENST00000263559 SP5Q6BEB4 398 aaPredicted RBP12.73□□□□□ -0.37
VPS26A-201ENST00000263559 VMO1Q7Z5L0 202 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 SFT2D1Q8WV19 159 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 NPCDR1Q9BY65 106 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 UTP20O75691 2785 aaKnown RBP12.73□□□□□ -0.37
VPS26A-201ENST00000263559 A0A1W2PPI3 338 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 PLXNB1O43157 2135 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 PDLIM4P50479 330 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 MRGPRG-AS1Q2M3A8 158 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 TPTE2P1Q5T6R2 138 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 KIR3DL3Q8N743 410 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 OR1L8Q8NGR8 309 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 GGACTQ9BVM4 153 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 DPM3Q9P2X0 92 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 WDR83OSQ9Y284 106 aa12.73□□□□□ -0.37
VPS26A-201ENST00000263559 A0A1W2PRD5 423 aa12.72□□□□□ -0.37
VPS26A-201ENST00000263559 A0A1W2PRF3 423 aa12.72□□□□□ -0.37
VPS26A-201ENST00000263559 A0A1W2PRM7 423 aa12.72□□□□□ -0.37
VPS26A-201ENST00000263559 SMCO3A2RU48 225 aa12.72□□□□□ -0.37
VPS26A-201ENST00000263559 ODF3BA8MYP8 253 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms