RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 APOHP02749 345 aaPredicted RBP12.16□□□□□ -0.46
CUX2-201ENST00000261726 FOXJ2Q9P0K8 574 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 TRBV5-3A0A0A0MS03 114 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 LNP1A1A4G5 178 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 NPIPB8E9PQR5 432 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 NPIPB9F8W1W9 429 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 TMEM250H0YL14 139 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 NPIPB7O75200 414 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 FGF5P12034 268 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 OTOFQ9HC10 1997 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 NUP214P35658 2090 aaPredicted RBP12.16□□□□□ -0.46
CUX2-201ENST00000261726 A0A1B0GV90 55 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 PEX7O00628 323 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 IGKV1D-33P01593 117 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 IGKV1-33P01594 117 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 NMBP08949 121 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 CYB5R2Q6BCY4 276 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 FAM90A26D6RGX4 464 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 TEX45Q8NA69 505 aa12.16□□□□□ -0.46
CUX2-201ENST00000261726 MRPS18AQ9NVS2 196 aaKnown RBP12.16□□□□□ -0.46
CUX2-201ENST00000261726 TRBV5-5A0A0J9YX44 114 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 SAPCD1Q5SSQ6 148 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 FBXL15Q9H469 300 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 C5orf66Q9H5L9 145 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 ARID1AO14497 2285 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 DRAM1Q8N682 238 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 AICDAQ9GZX7 198 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 GPR183P32249 361 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 CLEC19AQ6UXS0 136 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 FAM206AQ9NX38 181 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 FBXL7Q9UJT9 491 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 IGHV4-39P01824 125 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 IL6RP08887 468 aaPredicted RBP12.15□□□□□ -0.46
CUX2-201ENST00000261726 APCDD1LQ8NCL9 501 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 OR5A1Q8NGJ0 315 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 LOC285556D6RIA3 1793 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 TRBV9A0A0B4J1U6 114 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 C7orf66A4D0T2 115 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 GFRA3O60609 400 aa12.15□□□□□ -0.46
CUX2-201ENST00000261726 FAM90A10PA6NDY2 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A18PA6NE21 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A16PA6NEW6 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A20PA6NIJ5 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A8PA6NJQ4 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A7PA6NKC0 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A22PA8MWA6 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A12PA8MX19 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A5PA8MXJ8 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A23PA8MXZ1 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A15PP0C7V4 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A13PP0C7W8 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A14PP0C7W9 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM90A24PP0C7X0 464 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 PTGDSP41222 190 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 RSPO4Q2I0M5 234 aaPredicted RBP12.14□□□□□ -0.47
CUX2-201ENST00000261726 SPRED2Q7Z698 418 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 GLMPQ8WWB7 406 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 COLQQ9Y215 455 aaPredicted RBP12.14□□□□□ -0.47
CUX2-201ENST00000261726 SCN1AP35498 2009 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 CCDC88CQ9P219 2028 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 IGKV1-8A0A0C4DH67 115 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 DPRXA6NFQ7 191 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 FAM71F2Q6NXP2 309 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 C8orf82Q6P1X6 216 aaPredicted RBP12.14□□□□□ -0.47
CUX2-201ENST00000261726 SLC17A3O00476 420 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 PEF1Q9UBV8 284 aaKnown RBP12.14□□□□□ -0.47
CUX2-201ENST00000261726 CGAP01215 116 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 NGFRP08138 427 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 SFXN3Q9BWM7 321 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 IGLV1-36A0A0B4J1U3 117 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.14□□□□□ -0.47
CUX2-201ENST00000261726 SMIM8Q96KF7 97 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 LIMS1P48059 325 aa12.14□□□□□ -0.47
CUX2-201ENST00000261726 TRAV21A0A0B4J279 112 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 C5orf67F2Z3F1 127 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 GZMMP51124 257 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 TMEM187Q14656 261 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 PPP1R3EQ9H7J1 279 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 SFTA2Q6UW10 78 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 C19orf24Q9BVV8 132 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 IGHV3-11P01762 117 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 IMMP2LQ96T52 175 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 B9A039 149 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 COX6A1P12074 109 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 Q96M66 194 aa12.13□□□□□ -0.47
CUX2-201ENST00000261726 BRCA1P38398 1863 aaKnown RBP12.13□□□□□ -0.47
CUX2-201ENST00000261726 PRR32B1ATL7 298 aa12.12□□□□□ -0.47
CUX2-201ENST00000261726 CA1P00915 261 aaPredicted RBP12.12□□□□□ -0.47
CUX2-201ENST00000261726 PRB3Q04118 309 aaPredicted RBP12.12□□□□□ -0.47
CUX2-201ENST00000261726 FAM201AQ5SY85 155 aa12.12□□□□□ -0.47
CUX2-201ENST00000261726 SLC25A20O43772 301 aa12.12□□□□□ -0.47
CUX2-201ENST00000261726 GFI1BQ5VTD9 330 aa12.12□□□□□ -0.47
CUX2-201ENST00000261726 PPP1R27Q86WC6 154 aa12.12□□□□□ -0.47
CUX2-201ENST00000261726 MTURNQ8N3F0 131 aa12.12□□□□□ -0.47
CUX2-201ENST00000261726 SLC25A45Q8N413 288 aa12.12□□□□□ -0.47
CUX2-201ENST00000261726 OR4X2Q8NGF9 303 aa12.12□□□□□ -0.47
CUX2-201ENST00000261726 IGFBP2P18065 325 aa12.12□□□□□ -0.47
CUX2-201ENST00000261726 SDF2L1Q9HCN8 221 aa12.12□□□□□ -0.47
CUX2-201ENST00000261726 HS3ST3B1Q9Y662 390 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms