RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CGB1A6NKQ9 187 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 ISLRO14498 428 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 SAA2P0DJI9 122 aaPredicted RBP8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 FAM209BQ5JX69 171 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 ZNF319Q9P2F9 582 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 SNRPCP09234 159 aaKnown RBP8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 PAQR4Q8N4S7 273 aaPredicted RBP8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 GATAD1Q8WUU5 269 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 IFI27L2Q9H2X8 130 aa8.67□□□□□ -1.02
NIPAL3-201ENST00000003912 UCP1P25874 307 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 MORN2Q502X0 79 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 DHRS11Q6UWP2 260 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 EIF4E3Q8N5X7 224 aaKnown RBP8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 AQP10Q96PS8 301 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 HSPB7Q9UBY9 170 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 IGHV3-35A0A0C4DH35 117 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 SHISA3A0PJX4 238 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 TMEM116Q8NCL8 245 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 TRAV24A0A0B4J272 114 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 FAM74A7A6NL05 159 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 FABP4P15090 132 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 G0S2P27469 103 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 INTS1Q8N201 2190 aaKnown RBP8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 WNT2P09544 360 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 SULT1A2P50226 295 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 KLHDC1Q8N7A1 406 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 GALNT14Q96FL9 552 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 NABP2Q9BQ15 211 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 GGACTQ9BVM4 153 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 PLXNA4Q9HCM2 1894 aa8.66□□□□□ -1.02
NIPAL3-201ENST00000003912 CACNA1HO95180 2353 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 A8MWL6 223 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 TUSC1Q2TAM9 212 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 CYP2G1PQ6ZSU1 146 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 IFT22Q9H7X7 185 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 MSGN1A6NI15 193 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 IFITM3Q01628 133 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 WDR25Q64LD2 544 aaPredicted RBP8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 ALPK2Q86TB3 2170 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 A0A1W2PRX2 142 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 TMEM218A2RU14 115 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 NDUFS8O00217 210 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 GPX1P07203 203 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 RNASEH2CQ8TDP1 164 aaKnown RBP8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 SPSB4Q96A44 273 aa8.65□□□□□ -1.02
NIPAL3-201ENST00000003912 DPRXA6NFQ7 191 aa8.65□□□□□ -1.03
NIPAL3-201ENST00000003912 J3QRE1 110 aa8.65□□□□□ -1.03
NIPAL3-201ENST00000003912 IGHV3-48P01763 117 aa8.65□□□□□ -1.03
NIPAL3-201ENST00000003912 GPR183P32249 361 aa8.65□□□□□ -1.03
NIPAL3-201ENST00000003912 STPG2Q8N412 459 aa8.65□□□□□ -1.03
NIPAL3-201ENST00000003912 FAM24BQ8N5W8 94 aa8.65□□□□□ -1.03
NIPAL3-201ENST00000003912 SLC25A28Q96A46 364 aa8.65□□□□□ -1.03
NIPAL3-201ENST00000003912 TCAPO15273 167 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 IGHV3-23P01764 117 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 CSN3P07498 182 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 MYOD1P15172 320 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 RPS20P60866 119 aaKnown RBP8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 TMEM177Q53S58 311 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 MRPL54Q6P161 138 aaKnown RBP8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 KLHDC3Q9BQ90 382 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 FOXA2Q9Y261 457 aaPredicted RBP8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 TRAV20A0A0B4J274 112 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 TEX50A0A1B0GTY4 177 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 PRR32B1ATL7 298 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 AP4M1O00189 453 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 SAA1P0DJI8 122 aaPredicted RBP8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 AWAT1Q58HT5 328 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 OOSP1A8MZH6 123 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 SAMD13Q5VXD3 122 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 CLEC19AQ6UXS0 136 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 TEX45Q8NA69 505 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 CLRN3Q8NCR9 226 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 WNT10AQ9GZT5 417 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 H3BQ15 152 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 PRSS1P07477 247 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 MINOS1Q5TGZ0 78 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 FAM89BQ8N5H3 189 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 C8orf46Q8TAG6 207 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 CACNG8Q8WXS5 425 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 NIT2Q9NQR4 276 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 MINOS1-NBL1R4GNA1 71 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 RTTNQ86VV8 2226 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 UPK2O00526 184 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 TWIST1Q15672 202 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 HIST3H3Q16695 136 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 VMO1Q7Z5L0 202 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 RAB24Q969Q5 203 aa8.64□□□□□ -1.03
NIPAL3-201ENST00000003912 NLRC5Q86WI3 1866 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 FAM181BA6NEQ2 426 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 TIMM23O14925 209 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 RBFOX2O43251 390 aaKnown RBP eCLIP8.63□□□□□ -1.033e-10■■■■■ 36
NIPAL3-201ENST00000003912 IGKV3-15P01624 115 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 PTTG1IPP53801 180 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 CX3CL1P78423 397 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 MEF2BQ02080 365 aaPredicted RBP8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 HIST1H1AQ02539 215 aaPredicted RBP8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 PRB3Q04118 309 aaPredicted RBP8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 ADIPOQQ15848 244 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 IGF2-ASQ6U949 168 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms