RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Gm1527Q3V0P3 650 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr305Q7TS02 319 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Gm10600Q8BQ57 223 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Gas2l1Q8JZP9 678 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Poc1aQ8JZX3 405 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Vmn1r66Q8K4I0 310 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 MrgprfQ8VCJ6 343 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr1420Q8VF55 309 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 ApooQ9DCZ4 198 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Chst1Q9EQC0 411 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Cdk20Q9JHU3 346 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Sp5Q9JHX2 398 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Klk4Q9Z0M1 255 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Igk-V19-17P01633 149 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 AregP31955 248 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Hist1h1bP43276 223 aaKnown RBP16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 CortP56469 109 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Rab1AP62821 205 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Foxg1Q60987 481 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 CybaQ61462 192 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Ypel4Q65Z93 127 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr339Q8VGK8 309 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Cdc42ep3Q9CQC5 254 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Q9CQT9 129 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Msmo1Q9CRA4 293 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr1264Q9R0K2 308 aa16.03■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 P01657 111 aa16.02■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 GzmaP11032 260 aa16.02■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Rps23P62267 143 aaKnown RBP16.02■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Tspan7Q62283 249 aa16.02■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Tmem19Q91W52 336 aa16.02■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Rnf126Q91YL2 313 aa16.02■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Abhd12Q99LR1 398 aaKnown RBP16.02■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Tmem107Q9CPV0 140 aa16.02■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Rhebl1Q9D8T3 184 aa16.02■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Cd5lQ9QWK4 352 aa16.02■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 AtmQ62388 3066 aa16.02■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Ighv1-47A0A0A6YY41 117 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Igkv14-100A0A0G2JG36 117 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 OdamA1E960 273 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Tpsb2P21845 276 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 CamlgP49070 294 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Cks2P56390 79 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Zfp729bQ80VN4 1045 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Nmes1Q810Q5 83 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Mr1Q8HWB0 341 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Q8VCE4 163 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Olfr129Q8VEY1 330 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 BlnkQ9QUN3 457 aa16.02■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Tcrg-C4A0A075B6C7 190 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Vmn1r121K7N6J4 314 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Atpif1O35143 106 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 MdkP12025 140 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Clec3bP43025 202 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 B3gat2P59270 324 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Ear1P97426 155 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Gm6760Q0ZNK3 87 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Dusp23Q6NT99 150 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 ErasQ7TN89 227 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Olfr1396Q7TQS8 315 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Olfr1137Q7TR40 310 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Rnf170Q8CBG9 286 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Nup35Q8R4R6 325 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Olfr483Q8VG05 315 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Olfr156Q8VGA9 318 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Nxph3Q91VX5 252 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Slc25a10Q9QZD8 287 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Fzr1Q9R1K5 493 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Evx1P23683 416 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Mcpt8P43430 247 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Btn1a1Q62556 524 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Mrps26Q80ZS3 200 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 RprmQ9JJ72 109 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Ube2j1Q9JJZ4 318 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 LenepQ9WVB6 61 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Gm7173A0A0G2JEB6 3132 aa16.01■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Gm5678A0A1B0GRG8 277 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Gm4950D3YUM8 205 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Gm17669F6QL70 154 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Pax1P09084 446 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 PpicP30412 212 aaKnown RBP16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Fbxo7Q3U7U3 523 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Ctxn2Q3URE8 81 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Gm21943Q5FWD5 227 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Scgb2b27Q8R1E9 112 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Rnf151Q9CQ29 239 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Phf19Q9CXG9 578 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Ing5Q9D8Y8 240 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 DhdhQ9DBB8 333 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Lhx2Q9Z0S2 406 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Gm37797A0A1D5RLC8 261 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Gm6460F6YJZ8 199 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 HexbP20060 536 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Adat3Q6PAT0 349 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Ssxb2Q8C5Z3 165 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Ear10Q923L6 156 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Slc29a3Q99P65 475 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Gkn3Q9D0T7 191 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Myo15aQ9QZZ4 3511 aa16■□□□□ 0.15
Shkbp1-201ENSMUST00000003857 Kdf1A2A9F4 397 aa15.99■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 59.6 ms