RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CLEC7AQ9BXN2 247 aa14.06□□□□□ -0.16
PHGDH-208ENST00000641023 PARD6GQ9BYG4 376 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-208ENST00000641023 TCF19Q9Y242 345 aa14.06□□□□□ -0.16
PHGDH-208ENST00000641023 SRRM4A7MD48 611 aaKnown RBP14.05□□□□□ -0.16
PHGDH-208ENST00000641023 PMS2P5A8MQ11 134 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 IL6RP08887 468 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-208ENST00000641023 MC5RP33032 325 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 RAB13P51153 203 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 DIAPH2-AS1Q14236 149 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 TUSC1Q2TAM9 212 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 TMEM177Q53S58 311 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 AKR1C8PQ5T2L2 129 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 FAM213BQ8TBF2 198 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 HARBI1Q96MB7 349 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 WDR61Q9GZS3 305 aaKnown RBP14.05□□□□□ -0.16
PHGDH-208ENST00000641023 NARFLQ9H6Q4 476 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 FKBP11Q9NYL4 201 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 BET1LQ9NYM9 111 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 ONECUT1Q9UBC0 465 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 NDUFS7O75251 213 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 IFNA10P01566 189 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 IGLV1-47P01700 117 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 HOXA1P49639 335 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-208ENST00000641023 HLA-DRB5Q30154 266 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 BEND2Q8NDZ0 799 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 PSMG3Q9BT73 122 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-208ENST00000641023 ZNF257Q9Y2Q1 563 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 WASHC3Q9Y3C0 194 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 RFNGQ9Y644 331 aa14.05□□□□□ -0.16
PHGDH-208ENST00000641023 DCHS2Q6V1P9 2916 aa14.04□□□□□ -0.16
PHGDH-208ENST00000641023 LOC105371242A0A075B767 164 aa14.04□□□□□ -0.16
PHGDH-208ENST00000641023 C22orf46C9J442 243 aa14.04□□□□□ -0.16
PHGDH-208ENST00000641023 UPK2O00526 184 aa14.04□□□□□ -0.16
PHGDH-208ENST00000641023 ARG1P05089 322 aa14.04□□□□□ -0.16
PHGDH-208ENST00000641023 VDAC2P45880 294 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-208ENST00000641023 BPIFCQ8NFQ6 507 aa14.04□□□□□ -0.16
PHGDH-208ENST00000641023 TMEM147Q9BVK8 224 aa14.04□□□□□ -0.16
PHGDH-208ENST00000641023 ENY2Q9NPA8 101 aa14.04□□□□□ -0.16
PHGDH-208ENST00000641023 OR51B2Q9Y5P1 312 aa14.04□□□□□ -0.16
PHGDH-208ENST00000641023 C15orf62A8K5M9 175 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 SAA1P0DJI8 122 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-208ENST00000641023 PUSL1Q8N0Z8 303 aaKnown RBP14.03□□□□□ -0.16
PHGDH-208ENST00000641023 COMMD1Q8N668 190 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 VSTM2AQ8TAG5 236 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 UQCC1Q9NVA1 299 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 FBXO7Q9Y3I1 522 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 UBE2L5PA0A1B0GUS4 154 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 KBTBD11O94819 623 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 PRB1P04280 392 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 RPS16P62249 146 aaKnown RBP14.03□□□□□ -0.16
PHGDH-208ENST00000641023 SERF2P84101 59 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 AKR1C1Q04828 323 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 DPPA3Q6W0C5 159 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 TAF15Q92804 592 aaKnown RBP eCLIP14.03□□□□□ -0.16
PHGDH-208ENST00000641023 RBMXL1Q96E39 390 aaKnown RBP14.03□□□□□ -0.16
PHGDH-208ENST00000641023 BBC3Q96PG8 261 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-208ENST00000641023 RSG1Q9BU20 258 aa14.03□□□□□ -0.16
PHGDH-208ENST00000641023 AMMECR1Q9Y4X0 333 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-208ENST00000641023 BUB1B-PAK6H3BSN5 160 aa14.02□□□□□ -0.16
PHGDH-208ENST00000641023 AGPAT2O15120 278 aa14.02□□□□□ -0.16
PHGDH-208ENST00000641023 TMEM218A2RU14 115 aa14.02□□□□□ -0.17
PHGDH-208ENST00000641023 OVOL3O00110 214 aa14.02□□□□□ -0.17
PHGDH-208ENST00000641023 COX7A1P24310 79 aa14.02□□□□□ -0.17
PHGDH-208ENST00000641023 ARF6P62330 175 aa14.02□□□□□ -0.17
PHGDH-208ENST00000641023 RAB11AP62491 216 aa14.02□□□□□ -0.17
PHGDH-208ENST00000641023 TLE4Q04727 773 aa14.02□□□□□ -0.17
PHGDH-208ENST00000641023 OR5B3Q8NH48 314 aa14.02□□□□□ -0.17
PHGDH-208ENST00000641023 MS4A7Q9GZW8 240 aaPredicted RBP14.02□□□□□ -0.17
PHGDH-208ENST00000641023 TREM1Q9NP99 234 aa14.02□□□□□ -0.17
PHGDH-208ENST00000641023 M0R1W7 72 aa14.01□□□□□ -0.17
PHGDH-208ENST00000641023 USF1P22415 310 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-208ENST00000641023 SNCAP37840 140 aa14.01□□□□□ -0.17
PHGDH-208ENST00000641023 DLX1P56177 255 aa14.01□□□□□ -0.17
PHGDH-208ENST00000641023 VWC2Q2TAL6 325 aa14.01□□□□□ -0.17
PHGDH-208ENST00000641023 ETV3LQ6ZN32 361 aa14.01□□□□□ -0.17
PHGDH-208ENST00000641023 LFNGQ8NES3 379 aa14.01□□□□□ -0.17
PHGDH-208ENST00000641023 OR4A5Q8NH83 315 aa14.01□□□□□ -0.17
PHGDH-208ENST00000641023 INSIG2Q9Y5U4 225 aa14.01□□□□□ -0.17
PHGDH-208ENST00000641023 KLF2Q9Y5W3 355 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-208ENST00000641023 H2AFB1P0C5Y9 115 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 LGALS7P47929 136 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 SRSF3P84103 164 aaKnown RBP14□□□□□ -0.17
PHGDH-208ENST00000641023 PRCDQ00LT1 54 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 Q8N7P7 452 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 HINT2Q9BX68 163 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 PLEKHA3Q9HB20 300 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 TIMM9Q9Y5J7 89 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 APOC3P02656 99 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 DVL1P1P54792 670 aaPredicted RBP14□□□□□ -0.17
PHGDH-208ENST00000641023 RPL8P62917 257 aaKnown RBP14□□□□□ -0.17
PHGDH-208ENST00000641023 PNKDQ8N490 385 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 SLC24A4Q8NFF2 622 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 OR4P4Q8NGL7 312 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 RPEQ96AT9 228 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 GGACTQ9BVM4 153 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 COMMD5Q9GZQ3 224 aa14□□□□□ -0.17
PHGDH-208ENST00000641023 TEX50A0A1B0GTY4 177 aa13.99□□□□□ -0.17
PHGDH-208ENST00000641023 RNASEK-C17orf49H0YIS7 233 aa13.99□□□□□ -0.17
PHGDH-208ENST00000641023 RRHO14718 337 aa13.99□□□□□ -0.17
PHGDH-208ENST00000641023 ENSAO43768 121 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms