RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CA2P00918 260 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 KRASP01116 189 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 G6PCP35575 357 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 CX3CL1P78423 397 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 TMEM187Q14656 261 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 OR4A47Q6IF82 309 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 ZNF562Q6V9R5 426 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 CADM3Q8N126 398 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 ENKURQ8TC29 256 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 SEC22AQ96IW7 307 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 ZNF430Q9H8G1 570 aaPredicted RBP12.64□□□□□ -0.39
CLN6-216ENST00000636876 TMEM140Q9NV12 185 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 NUDT15Q9NV35 164 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 BET1LQ9NYM9 111 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 ANK2Q01484 3957 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 CREBL2O60519 120 aaPredicted RBP12.63□□□□□ -0.39
CLN6-216ENST00000636876 CDS2O95674 445 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 IL6RP08887 468 aaPredicted RBP12.63□□□□□ -0.39
CLN6-216ENST00000636876 ANXA3P12429 323 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 ANXA7P20073 488 aaKnown RBP12.63□□□□□ -0.39
CLN6-216ENST00000636876 VAMP1P23763 118 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 SSBP2P81877 361 aaPredicted RBP12.63□□□□□ -0.39
CLN6-216ENST00000636876 NDPQ00604 133 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 PPP1R1AQ13522 171 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 NRARPQ7Z6K4 114 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 MMD2Q8IY49 270 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 DUSP18Q8NEJ0 188 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 OR4A5Q8NH83 315 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 LHFPL5Q8TAF8 219 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 OR51J1Q9H342 316 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 RNF114Q9Y508 228 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 NUBP2Q9Y5Y2 271 aa12.63□□□□□ -0.39
CLN6-216ENST00000636876 TRAV6A0A075B6T7 132 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 AP4M1O00189 453 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 UPK2O00526 184 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 ATG12O94817 140 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 SFT2D2O95562 160 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 IGKV1-5P01602 117 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 H2AFB2P0C5Z0 115 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 COMPP49747 757 aaPredicted RBP12.62□□□□□ -0.39
CLN6-216ENST00000636876 PROK1P58294 105 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 GNB1P62873 340 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 DCTN2Q13561 401 aaKnown RBP12.62□□□□□ -0.39
CLN6-216ENST00000636876 AWAT1Q58HT5 328 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 FOXRED2Q8IWF2 684 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 SELENOHQ8IZQ5 122 aaKnown RBP12.62□□□□□ -0.39
CLN6-216ENST00000636876 RBPMSQ93062 196 aaKnown RBP12.62□□□□□ -0.39
CLN6-216ENST00000636876 IL22RA2Q969J5 263 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 TMEM56Q96MV1 263 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 ALX4Q9H161 411 aaPredicted RBP12.62□□□□□ -0.39
CLN6-216ENST00000636876 PARP11Q9NR21 331 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 PRR13Q9NZ81 148 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 TMEM56-RWDD3S4R434 201 aa12.62□□□□□ -0.39
CLN6-216ENST00000636876 TRAV3A0A0B4J244 114 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 ATP6V0E1O15342 81 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 CNIH1O95406 144 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 IGF1P05019 195 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 OR4E1P0C645 316 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 AKR1C2P52895 323 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 SRPXP78539 464 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 FXYD3Q14802 87 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 TNXAQ16473 311 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 TMEM268Q5VZI3 342 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 H2BFWTQ7Z2G1 175 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 ZNF695Q8IW36 515 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 ARPC1AQ92747 370 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 NOL4LQ96MY1 436 aaPredicted RBP12.61□□□□□ -0.39
CLN6-216ENST00000636876 WNT10AQ9GZT5 417 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 ZNF580Q9UK33 172 aa12.61□□□□□ -0.39
CLN6-216ENST00000636876 C9orf170A2RU37 121 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 ACTL6BO94805 426 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 FGF2P09038 288 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 P0C879 139 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 EGR2P11161 476 aaPredicted RBP12.6□□□□□ -0.39
CLN6-216ENST00000636876 HLA-GP17693 338 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 MAS1LP35410 378 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 MECP2P51608 486 aaKnown RBP12.6□□□□□ -0.39
CLN6-216ENST00000636876 CRIP2P52943 208 aaPredicted RBP12.6□□□□□ -0.39
CLN6-216ENST00000636876 RPL8P62917 257 aaKnown RBP12.6□□□□□ -0.39
CLN6-216ENST00000636876 DHRS2Q13268 280 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 ANKRD55Q3KP44 614 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 C4orf46Q504U0 113 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 LYG2Q86SG7 212 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 LGI3Q8N145 548 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 STPG2Q8N412 459 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 KLHDC1Q8N7A1 406 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 GRPEL2Q8TAA5 225 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 ABHD5Q8WTS1 349 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 CASTOR1Q8WTX7 329 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 RRNAD1Q96FB5 475 aaKnown RBP12.6□□□□□ -0.39
CLN6-216ENST00000636876 LINC00527Q9UJ94 153 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 FBXO7Q9Y3I1 522 aa12.6□□□□□ -0.39
CLN6-216ENST00000636876 SNAPC5O75971 98 aa12.59□□□□□ -0.39
CLN6-216ENST00000636876 PTTG1O95997 202 aa12.59□□□□□ -0.39
CLN6-216ENST00000636876 HLA-AP01891 365 aaKnown RBP12.59□□□□□ -0.39
CLN6-216ENST00000636876 OR9G9P0C7N8 305 aa12.59□□□□□ -0.39
CLN6-216ENST00000636876 RAB25P57735 213 aa12.59□□□□□ -0.39
CLN6-216ENST00000636876 C10orf55Q5SWW7 151 aa12.59□□□□□ -0.39
CLN6-216ENST00000636876 PLET1Q6UQ28 207 aa12.59□□□□□ -0.39
CLN6-216ENST00000636876 LRTM2Q8N967 370 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms