RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 FAM90A23PA8MXZ1 464 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 APOA2P02652 100 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 FAM90A15PP0C7V4 464 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 SEC11BP0C7V7 166 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 FAM90A13PP0C7W8 464 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 FAM90A14PP0C7W9 464 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 FAM90A24PP0C7X0 464 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 THBS3P49746 956 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 RAB13P51153 203 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 LGALS4P56470 323 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 ID3Q02535 119 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 MST1LQ2TV78 715 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 FAM78BQ5VT40 261 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 OR10A7Q8NGE5 316 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 SNX22Q96L94 193 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 TMEM56Q96MV1 263 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 KPTNQ9Y664 436 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 TMEM56-RWDD3S4R434 201 aa6.23□□□□□ -1.41
PKP4-217ENST00000628904 RAB19A4D1S5 217 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 MBD3L4A6NDZ8 208 aaPredicted RBP6.22□□□□□ -1.41
PKP4-217ENST00000628904 MBD3L3A6NE82 208 aaPredicted RBP6.22□□□□□ -1.41
PKP4-217ENST00000628904 MBD3L5A6NJ08 208 aaPredicted RBP6.22□□□□□ -1.41
PKP4-217ENST00000628904 MPZP25189 248 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 S100A2P29034 98 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 CD200P41217 278 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 PSMB3P49720 205 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 ADIPOQQ15848 244 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 RTL8BQ17RB0 113 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 CT45A1Q5HYN5 189 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 SLC16A13Q7RTY0 426 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 OR4P4Q8NGL7 312 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 OR13D1Q8NGV5 346 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 CT45A3Q8NHU0 189 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 MBD3L2Q8NHZ7 208 aaPredicted RBP6.22□□□□□ -1.41
PKP4-217ENST00000628904 TAF15Q92804 592 aaKnown RBP eCLIP6.22□□□□□ -1.41
PKP4-217ENST00000628904 EAF1Q96JC9 268 aaPredicted RBP6.22□□□□□ -1.41
PKP4-217ENST00000628904 C17orf100A8MU93 164 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 SRRM5B3KS81 715 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 DNASE2O00115 360 aaPredicted RBP6.22□□□□□ -1.41
PKP4-217ENST00000628904 DLL1O00548 723 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 TAS2R30P59541 319 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 SLC35E4Q6ICL7 350 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 MRGPRGQ86SM5 289 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 RAB39BQ96DA2 213 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 SAT2Q96F10 170 aaPredicted RBP6.22□□□□□ -1.41
PKP4-217ENST00000628904 ZNF251Q9BRH9 671 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 PARP11Q9NR21 331 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 ARPC4-TTLL3A0A0A6YYG9 625 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 PITX3O75364 302 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 COX5AP20674 150 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 TCL1AP56279 114 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 SSX2Q16385 188 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 RAB24Q969Q5 203 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 RCC1LQ96I51 464 aaKnown RBP6.22□□□□□ -1.41
PKP4-217ENST00000628904 ZNF714Q96N38 554 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 MRPL20Q9BYC9 149 aaKnown RBP6.22□□□□□ -1.41
PKP4-217ENST00000628904 BARX1Q9HBU1 254 aaPredicted RBP6.22□□□□□ -1.41
PKP4-217ENST00000628904 TMEM106BQ9NUM4 274 aa6.22□□□□□ -1.41
PKP4-217ENST00000628904 RAB29O14966 203 aa6.21□□□□□ -1.41
PKP4-217ENST00000628904 IFNA1P01562 189 aa6.21□□□□□ -1.41
PKP4-217ENST00000628904 CD1BP29016 333 aa6.21□□□□□ -1.41
PKP4-217ENST00000628904 PAX9P55771 341 aa6.21□□□□□ -1.41
PKP4-217ENST00000628904 TGIF2LXQ8IUE1 241 aa6.21□□□□□ -1.41
PKP4-217ENST00000628904 OR4S2Q8NH73 311 aa6.21□□□□□ -1.41
PKP4-217ENST00000628904 TMEM37Q8WXS4 190 aa6.21□□□□□ -1.41
PKP4-217ENST00000628904 UHRF2Q96PU4 802 aa6.21□□□□□ -1.41
PKP4-217ENST00000628904 K7N7A8 449 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 ADH4P08319 380 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 WNT2P09544 360 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 CCKARP32238 428 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 CDC34P49427 236 aaPredicted RBP6.21□□□□□ -1.42
PKP4-217ENST00000628904 FAM3BP58499 235 aaPredicted RBP6.21□□□□□ -1.42
PKP4-217ENST00000628904 GNB2P62879 340 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 RAB31Q13636 194 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 RPEQ96AT9 228 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 OR5B12Q96R08 314 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 CABLES2Q9BTV7 478 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 TPPP3Q9BW30 176 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 GSX1Q9H4S2 264 aaPredicted RBP6.21□□□□□ -1.42
PKP4-217ENST00000628904 ANAPC10Q9UM13 185 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 TCF19Q9Y242 345 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 RNF115Q9Y4L5 304 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 OR51B2Q9Y5P1 312 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 IGHV3OR16-13A0A075B7E8 117 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 TGIF2-C20orf24A0A0A6YYL0 155 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 IGHV3-74A0A0B4J1X5 117 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 IGHV1-69-2A0A0G2JMI3 117 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 CEACAM18A8MTB9 384 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 PRSS44E7EML9 344 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.21□□□□□ -1.42
PKP4-217ENST00000628904 IGHV3-23P01764 117 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 S100PP25815 95 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 NPY1RP25929 384 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 DUTP33316 252 aaKnown RBP6.21□□□□□ -1.42
PKP4-217ENST00000628904 TMPRSS3P57727 454 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 ERVK11-1P61568 191 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 GAMTQ14353 236 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 OR4A47Q6IF82 309 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 LINC00596Q86U02 117 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 SSX3Q99909 188 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms