RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 BRWD1-AS2P59051 145 aa15.46■□□□□ 0.06
CNOT9-209ENST00000627282 VAMP2P63027 116 aa15.46■□□□□ 0.06
CNOT9-209ENST00000627282 ABHD12Q8N2K0 398 aa15.46■□□□□ 0.06
CNOT9-209ENST00000627282 LRRC20Q8TCA0 184 aa15.46■□□□□ 0.06
CNOT9-209ENST00000627282 CLEC7AQ9BXN2 247 aa15.46■□□□□ 0.06
CNOT9-209ENST00000627282 PFDN2Q9UHV9 154 aa15.46■□□□□ 0.06
CNOT9-209ENST00000627282 FAM24AA6NFZ4 105 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 NPFFO15130 113 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 FGF16O43320 207 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 TCF21O43680 179 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 CHST1O43916 411 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 RAMP3O60896 148 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 PROP1O75360 226 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 P0C879 139 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 DUTP33316 252 aaKnown RBP15.45■□□□□ 0.06
CNOT9-209ENST00000627282 ZNF134P52741 427 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 C9orf139Q6ZV77 190 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 SLC25A31Q9H0C2 315 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 IFI27L2Q9H2X8 130 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 LYRM2Q9NU23 88 aaPredicted RBP15.45■□□□□ 0.06
CNOT9-209ENST00000627282 COA4Q9NYJ1 87 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 ZNRD1Q9P1U0 126 aa15.45■□□□□ 0.06
CNOT9-209ENST00000627282 LINC00473A8K010 186 aa15.44■□□□□ 0.06
CNOT9-209ENST00000627282 WRBO00258 174 aa15.44■□□□□ 0.06
CNOT9-209ENST00000627282 SAA4P35542 130 aa15.44■□□□□ 0.06
CNOT9-209ENST00000627282 BPIFB3P59826 476 aa15.44■□□□□ 0.06
CNOT9-209ENST00000627282 SRSF2Q01130 221 aaKnown RBP15.44■□□□□ 0.06
CNOT9-209ENST00000627282 EWSR1Q01844 656 aaKnown RBP eCLIP15.44■□□□□ 0.06
CNOT9-209ENST00000627282 ZNF816Q0VGE8 651 aaPredicted RBP15.44■□□□□ 0.06
CNOT9-209ENST00000627282 AANATQ16613 207 aa15.44■□□□□ 0.06
CNOT9-209ENST00000627282 IZUMO4Q1ZYL8 232 aa15.44■□□□□ 0.06
CNOT9-209ENST00000627282 LDLRAD2Q5SZI1 272 aa15.44■□□□□ 0.06
CNOT9-209ENST00000627282 CD300LFQ8TDQ1 290 aa15.44■□□□□ 0.06
CNOT9-209ENST00000627282 AJUBAQ96IF1 538 aa15.44■□□□□ 0.06
CNOT9-209ENST00000627282 SMIM3Q9BZL3 60 aa15.44■□□□□ 0.06
CNOT9-209ENST00000627282 MS4A7Q9GZW8 240 aaPredicted RBP15.44■□□□□ 0.06
CNOT9-209ENST00000627282 ARV1Q9H2C2 271 aa15.44■□□□□ 0.06
CNOT9-209ENST00000627282 DNHD1Q96M86 4753 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 IGSF23A1L1A6 192 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 IGLV1-47P01700 117 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 ARG1P05089 322 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 PAX9P55771 341 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 NHLH2Q02577 135 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 TUSC1Q2TAM9 212 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 KRTAP24-1Q3LI83 254 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 CT45A1Q5HYN5 189 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 OR2B11Q5JQS5 317 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 EIF5AL1Q6IS14 154 aaKnown RBP15.43■□□□□ 0.06
CNOT9-209ENST00000627282 UBAC2Q8NBM4 344 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 CT45A3Q8NHU0 189 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 C17orf50Q8WW18 174 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 TMED6Q8WW62 240 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 ABHD14AQ9BUJ0 271 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 WFDC1Q9HC57 220 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 BORCS7-ASMTA0A0B4J1R7 106 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 MFSD2BA6NFX1 497 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 SLC31A2O15432 143 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 S1PR2O95136 353 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 TMEM50AO95807 157 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 GNG10P50151 68 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 CAV2P51636 162 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 MIDNQ504T8 468 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 LHFPL4Q7Z7J7 247 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 TMEM252Q8N6L7 170 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.43■□□□□ 0.06
CNOT9-209ENST00000627282 ZNF439Q8NDP4 499 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 OR4P4Q8NGL7 312 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 OR9G1Q8NH87 305 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 SPATA3Q8NHX4 192 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 RNF141Q8WVD5 230 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 RAB40CQ96S21 281 aa15.43■□□□□ 0.06
CNOT9-209ENST00000627282 A0A0U1RQK1 487 aa15.42■□□□□ 0.06
CNOT9-209ENST00000627282 A0A1W2PPE3 182 aa15.42■□□□□ 0.06
CNOT9-209ENST00000627282 FAM90A26D6RGX4 464 aa15.42■□□□□ 0.06
CNOT9-209ENST00000627282 J3QR06 171 aa15.42■□□□□ 0.06
CNOT9-209ENST00000627282 RAB29O14966 203 aa15.42■□□□□ 0.06
CNOT9-209ENST00000627282 NXPH3O95157 252 aa15.42■□□□□ 0.06
CNOT9-209ENST00000627282 BEND2Q8NDZ0 799 aa15.42■□□□□ 0.06
CNOT9-209ENST00000627282 M0R1X1 148 aa15.41■□□□□ 0.06
CNOT9-209ENST00000627282 TOR1AO14656 332 aa15.41■□□□□ 0.06
CNOT9-209ENST00000627282 G6PCP35575 357 aa15.41■□□□□ 0.06
CNOT9-209ENST00000627282 RPL23AP62750 156 aaKnown RBP15.41■□□□□ 0.06
CNOT9-209ENST00000627282 BAXQ07812 192 aa15.41■□□□□ 0.06
CNOT9-209ENST00000627282 HLA-DRB5Q30154 266 aa15.41■□□□□ 0.06
CNOT9-209ENST00000627282 ODF3L1Q8IXM7 274 aa15.41■□□□□ 0.06
CNOT9-209ENST00000627282 ZNF48Q96MX3 618 aaPredicted RBP15.41■□□□□ 0.06
CNOT9-209ENST00000627282 MDFIC2A0A1B0GVS7 189 aa15.4■□□□□ 0.06
CNOT9-209ENST00000627282 RBFOX2O43251 390 aaKnown RBP eCLIP15.4■□□□□ 0.062e-12■■■□□ 14.8
CNOT9-209ENST00000627282 SYNGR2O43760 224 aa15.4■□□□□ 0.06
CNOT9-209ENST00000627282 KRASP01116 189 aa15.4■□□□□ 0.06
CNOT9-209ENST00000627282 LINC00205P59089 165 aa15.4■□□□□ 0.06
CNOT9-209ENST00000627282 DEFB112Q30KQ8 113 aa15.4■□□□□ 0.06
CNOT9-209ENST00000627282 RPL39P5Q59GN2 51 aa15.4■□□□□ 0.06
CNOT9-209ENST00000627282 HSD17B13Q7Z5P4 300 aaPredicted RBP15.4■□□□□ 0.06
CNOT9-209ENST00000627282 EIF4E3Q8N5X7 224 aaKnown RBP15.4■□□□□ 0.06
CNOT9-209ENST00000627282 ZNF596Q8TC21 504 aa15.4■□□□□ 0.06
CNOT9-209ENST00000627282 ZNF418Q8TF45 676 aaPredicted RBP15.4■□□□□ 0.06
CNOT9-209ENST00000627282 GINS3Q9BRX5 216 aa15.4■□□□□ 0.06
CNOT9-209ENST00000627282 PAX6P26367 422 aa15.39■□□□□ 0.05
CNOT9-209ENST00000627282 KIR2DS2P43631 304 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms