RNA–Protein interactions for RNA: ENST00000618318.1

RPRD1B-208, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-208ENST00000618318 LPAR2Q9HBW0 351 aa6.42□□□□□ -1.38
RPRD1B-208ENST00000618318 TMEM140Q9NV12 185 aa6.42□□□□□ -1.38
RPRD1B-208ENST00000618318 BEX4Q9NWD9 120 aaPredicted RBP6.42□□□□□ -1.38
RPRD1B-208ENST00000618318 BET1LQ9NYM9 111 aa6.42□□□□□ -1.38
RPRD1B-208ENST00000618318 HSPB7Q9UBY9 170 aa6.42□□□□□ -1.38
RPRD1B-208ENST00000618318 NUP50Q9UKX7 468 aa6.42□□□□□ -1.38
RPRD1B-208ENST00000618318 POLR3KQ9Y2Y1 108 aaPredicted RBP6.42□□□□□ -1.38
RPRD1B-208ENST00000618318 STRAPQ9Y3F4 350 aaKnown RBP6.42□□□□□ -1.38
RPRD1B-208ENST00000618318 MINOS1-NBL1R4GNA1 71 aa6.42□□□□□ -1.38
RPRD1B-208ENST00000618318 ABCA4P78363 2273 aa6.42□□□□□ -1.38
RPRD1B-208ENST00000618318 RAI1Q7Z5J4 1906 aaPredicted RBP6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 IGHV2-70DA0A0C4DH43 119 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 KIAA1324LA8MWY0 1029 aaPredicted RBP6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 UPK2O00526 184 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 TOX4O94842 621 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 SPDEFO95238 335 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 IFNA5P01569 189 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 ARG1P05089 322 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 USF1P22415 310 aaPredicted RBP6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 COX7A1P24310 79 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 HTR2BP41595 481 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 SULT1A1P50225 295 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 DVL1P1P54792 670 aaPredicted RBP6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 HSPE1P61604 102 aaKnown RBP6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 LMO4P61968 165 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 RAB11AP62491 216 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 EWSR1Q01844 656 aaKnown RBP eCLIP6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 AARDQ4LEZ3 155 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 CLLU1Q5K131 121 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 SSX9Q7RTT3 188 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 MOB3BQ86TA1 216 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 LRRC75A-AS1Q8N1F1 130 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 UBAC2Q8NBM4 344 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 SCGB1C1Q8TD33 95 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 DTD1Q8TEA8 209 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 HARBI1Q96MB7 349 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 RBKSQ9H477 322 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 C11orf1Q9H5F2 150 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 ZNF257Q9Y2Q1 563 aa6.41□□□□□ -1.38
RPRD1B-208ENST00000618318 MSGN1A6NI15 193 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 VWC2LB2RUY7 222 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 TSPAN9O75954 239 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 KBTBD11O94819 623 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 IAPPP10997 89 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 CD1BP29016 333 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 F2RL1P55085 397 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 LINC00205P59089 165 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 LCN2P80188 198 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 ERHP84090 104 aaKnown RBP6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 RELBQ01201 579 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 PDLIM3Q53GG5 364 aaPredicted RBP6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 SPANXN5Q5MJ07 72 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 OR4A47Q6IF82 309 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 SLC25A24Q6NUK1 477 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 C1orf229Q6ZS94 237 aaPredicted RBP6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 PDZD9Q8IXQ8 264 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 ZNF295-AS1Q8N0V1 137 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 Q8N7P7 452 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 TEX45Q8NA69 505 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 OR10P1Q8NGE3 313 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 OR5B3Q8NH48 314 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 RNF141Q8WVD5 230 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 PINX1Q96BK5 328 aaKnown RBP6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 GNPNAT1Q96EK6 184 aaPredicted RBP6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 PERPQ96FX8 193 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 COMMD5Q9GZQ3 224 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 MS4A7Q9GZW8 240 aaPredicted RBP6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 CYTL1Q9NRR1 136 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 FBXL17Q9UF56 701 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 FOXA2Q9Y261 457 aaPredicted RBP6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 TBL2Q9Y4P3 447 aaKnown RBP6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 OR51B2Q9Y5P1 312 aa6.4□□□□□ -1.38
RPRD1B-208ENST00000618318 MED13LQ71F56 2210 aa6.4□□□□□ -1.39
RPRD1B-208ENST00000618318 YLPM1P49750 1951 aaKnown RBP6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 IGHV1-3A0A0C4DH29 117 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 A0A1W2PN81 502 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 C15orf61A6NNL5 157 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 KCNAB3O43448 404 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 ACTL6BO94805 426 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 NXPH3O95157 252 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 CFDP00746 253 aaPredicted RBP6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 OR9G9P0C7N8 305 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 SEC11BP0C7V7 166 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 S100A1P23297 94 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 GATA3P23771 443 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 ZFP36P26651 326 aaKnown RBP6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 MAS1LP35410 378 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 CHRNA7P36544 502 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 REG1BP48304 166 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 HOXA1P49639 335 aaPredicted RBP6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 RAB5CP51148 216 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 UBE2E1P51965 193 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 SUB1P53999 127 aaKnown RBP eCLIP6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 PAX9P55771 341 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 BLOC1S1P78537 153 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 NHLH2Q02577 135 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 IZUMO4Q1ZYL8 232 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 CLEC12BQ2HXU8 276 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 UTF1Q5T230 341 aa6.39□□□□□ -1.39
RPRD1B-208ENST00000618318 TPTE2P1Q5T6R2 138 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms