RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 FAM71E2Q8N5Q1 922 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 SLC35G3Q8N808 338 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 C5orf56Q8N8D9 126 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 OR4A5Q8NH83 315 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 LSM10Q969L4 123 aaKnown RBP11.7□□□□□ -0.54
CD48-203ENST00000613788 TMEM140Q9NV12 185 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 CRYBA1P05813 215 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 CRYGBP07316 175 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 LYZL2Q7Z4W2 148 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 UXS1Q8NBZ7 420 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 TMEM167AQ8TBQ9 72 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 NPFFR1Q9GZQ6 430 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 TMED3Q9Y3Q3 217 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 MMP24Q9Y5R2 645 aa11.7□□□□□ -0.54
CD48-203ENST00000613788 FAM181BA6NEQ2 426 aa11.69□□□□□ -0.54
CD48-203ENST00000613788 SNAPC5O75971 98 aa11.69□□□□□ -0.54
CD48-203ENST00000613788 KBTBD11O94819 623 aa11.69□□□□□ -0.54
CD48-203ENST00000613788 IFNA21P01568 189 aa11.69□□□□□ -0.54
CD48-203ENST00000613788 IGKV1-5P01602 117 aa11.69□□□□□ -0.54
CD48-203ENST00000613788 IL6RP08887 468 aaPredicted RBP11.69□□□□□ -0.54
CD48-203ENST00000613788 MMD2Q8IY49 270 aa11.69□□□□□ -0.54
CD48-203ENST00000613788 RANBP3Q9H6Z4 567 aaPredicted RBP11.69□□□□□ -0.54
CD48-203ENST00000613788 C7orf66A4D0T2 115 aa11.68□□□□□ -0.54
CD48-203ENST00000613788 UPK2O00526 184 aa11.68□□□□□ -0.54
CD48-203ENST00000613788 ACTL6BO94805 426 aa11.68□□□□□ -0.54
CD48-203ENST00000613788 HLA-DRB1P01911 266 aa11.68□□□□□ -0.54
CD48-203ENST00000613788 AMY1AP04745 511 aa11.68□□□□□ -0.54
CD48-203ENST00000613788 HOXB5P09067 269 aa11.68□□□□□ -0.54
CD48-203ENST00000613788 PRSS8Q16651 343 aa11.68□□□□□ -0.54
CD48-203ENST00000613788 OR4A16Q8NH70 328 aa11.68□□□□□ -0.54
CD48-203ENST00000613788 CLCC1Q96S66 551 aa11.68□□□□□ -0.54
CD48-203ENST00000613788 PRSS22Q9GZN4 317 aa11.68□□□□□ -0.54
CD48-203ENST00000613788 ALG5Q9Y673 324 aa11.68□□□□□ -0.54
CD48-203ENST00000613788 DBX1A6NMT0 343 aa11.67□□□□□ -0.54
CD48-203ENST00000613788 FCN1O00602 326 aa11.67□□□□□ -0.54
CD48-203ENST00000613788 FGF2P09038 288 aa11.67□□□□□ -0.54
CD48-203ENST00000613788 MAS1LP35410 378 aa11.67□□□□□ -0.54
CD48-203ENST00000613788 RPL8P62917 257 aaKnown RBP11.67□□□□□ -0.54
CD48-203ENST00000613788 BLCAPP62952 87 aa11.67□□□□□ -0.54
CD48-203ENST00000613788 ZNF562Q6V9R5 426 aa11.67□□□□□ -0.54
CD48-203ENST00000613788 GPR146Q96CH1 333 aa11.67□□□□□ -0.54
CD48-203ENST00000613788 OR51J1Q9H342 316 aa11.67□□□□□ -0.54
CD48-203ENST00000613788 ZNF430Q9H8G1 570 aaPredicted RBP11.67□□□□□ -0.54
CD48-203ENST00000613788 TPSG1Q9NRR2 321 aa11.67□□□□□ -0.54
CD48-203ENST00000613788 FKBP11Q9NYL4 201 aa11.67□□□□□ -0.54
CD48-203ENST00000613788 A0A0B4J293 547 aa11.66□□□□□ -0.54
CD48-203ENST00000613788 SSNA1O43805 119 aa11.66□□□□□ -0.54
CD48-203ENST00000613788 RBMXL2O75526 392 aaKnown RBP11.66□□□□□ -0.54
CD48-203ENST00000613788 CA2P00918 260 aa11.66□□□□□ -0.54
CD48-203ENST00000613788 OR9G9P0C7N8 305 aa11.66□□□□□ -0.54
CD48-203ENST00000613788 P0C879 139 aa11.66□□□□□ -0.54
CD48-203ENST00000613788 PJVKQ0ZLH3 352 aa11.66□□□□□ -0.54
CD48-203ENST00000613788 NMSQ5H8A3 153 aa11.66□□□□□ -0.54
CD48-203ENST00000613788 C9orf152Q5JTZ5 239 aa11.66□□□□□ -0.54
CD48-203ENST00000613788 GGNBP1Q5YKI7 109 aa11.66□□□□□ -0.54
CD48-203ENST00000613788 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.66□□□□□ -0.54
CD48-203ENST00000613788 PRNDQ9UKY0 176 aa11.66□□□□□ -0.54
CD48-203ENST00000613788 TRAV3A0A0B4J244 114 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 A0A0G2JRQ6 117 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 A0A1B0GU03 582 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 KCNAB3O43448 404 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 ADAP1O75689 374 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 CNIH1O95406 144 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 SLC25A6P12236 298 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 HLA-GP17693 338 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 GNB1P62873 340 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 CX3CL1P78423 397 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 RELBQ01201 579 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 TNXAQ16473 311 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 IZUMO4Q1ZYL8 232 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 THOC7Q6I9Y2 204 aaKnown RBP11.65□□□□□ -0.54
CD48-203ENST00000613788 SPIN2AQ99865 258 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 TEP1Q99973 2627 aaKnown RBP11.65□□□□□ -0.54
CD48-203ENST00000613788 SPIN2BQ9BPZ2 258 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 COMMD5Q9GZQ3 224 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 CACFD1Q9UGQ2 172 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 NSG2Q9Y328 171 aa11.65□□□□□ -0.54
CD48-203ENST00000613788 SH2D7A6NKC9 451 aaPredicted RBP11.65□□□□□ -0.55
CD48-203ENST00000613788 C15orf61A6NNL5 157 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 IGHG2P01859 326 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 SULT1A3P0DMM9 295 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 SULT1A4P0DMN0 295 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 SMCO1Q147U7 214 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 FXYD3Q14802 87 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 MRGPRG-AS1Q2M3A8 158 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 ARSJQ5FYB0 599 aaPredicted RBP11.65□□□□□ -0.55
CD48-203ENST00000613788 Q6ZRM9 215 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 SLC35E3Q7Z769 313 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 FOXRED2Q8IWF2 684 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 COA4Q9NYJ1 87 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 CACNG5Q9UF02 275 aa11.65□□□□□ -0.55
CD48-203ENST00000613788 FOXA2Q9Y261 457 aaPredicted RBP11.65□□□□□ -0.55
CD48-203ENST00000613788 NIPBLQ6KC79 2804 aaeCLIP11.64□□□□□ -0.55
CD48-203ENST00000613788 IGHV7-81A0A0B4J1V7 117 aa11.64□□□□□ -0.55
CD48-203ENST00000613788 TSPAN9O75954 239 aa11.64□□□□□ -0.55
CD48-203ENST00000613788 Q6ZNX1 250 aa11.64□□□□□ -0.55
CD48-203ENST00000613788 ZNF429Q86V71 674 aa11.64□□□□□ -0.55
CD48-203ENST00000613788 LURAP1LQ8IV03 231 aa11.64□□□□□ -0.55
CD48-203ENST00000613788 OR5B3Q8NH48 314 aa11.64□□□□□ -0.55
CD48-203ENST00000613788 HSPB9Q9BQS6 159 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms