RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 MMD2Q8IY49 270 aa15.09■□□□□ 0.01
DDX39A-214ENST00000590556 STPG2Q8N412 459 aa15.09■□□□□ 0.01
DDX39A-214ENST00000590556 OR4A5Q8NH83 315 aa15.09■□□□□ 0.01
DDX39A-214ENST00000590556 ZNF747Q9BV97 191 aa15.09■□□□□ 0.01
DDX39A-214ENST00000590556 BET1LQ9NYM9 111 aa15.09■□□□□ 0.01
DDX39A-214ENST00000590556 TBC1D24Q9ULP9 559 aa15.09■□□□□ 0.01
DDX39A-214ENST00000590556 KCNIP3Q9Y2W7 256 aa15.09■□□□□ 0.01
DDX39A-214ENST00000590556 ARPC1BO15143 372 aaKnown RBP15.08■□□□□ 0
DDX39A-214ENST00000590556 IGF1P05019 195 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 UCP1P25874 307 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 G6PCP35575 357 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 NDPQ00604 133 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 IFITM3Q01628 133 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 DHODHQ02127 395 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 TNXAQ16473 311 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 MZT2BQ6NZ67 158 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 CENPSQ8N2Z9 138 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 SPATA3Q8NHX4 192 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 ARPC1AQ92747 370 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 GON7Q9BXV9 100 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 TMEM222Q9H0R3 208 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 TMEM140Q9NV12 185 aa15.08■□□□□ 0
DDX39A-214ENST00000590556 PSMB11A5LHX3 300 aa15.07■□□□□ 0
DDX39A-214ENST00000590556 ACTL6BO94805 426 aa15.07■□□□□ 0
DDX39A-214ENST00000590556 IGKV1-39P01597 117 aa15.07■□□□□ 0
DDX39A-214ENST00000590556 IGKV1D-39P04432 117 aa15.07■□□□□ 0
DDX39A-214ENST00000590556 VDAC1P21796 283 aa15.07■□□□□ 0
DDX39A-214ENST00000590556 KRTAP10-3P60369 221 aa15.07■□□□□ 0
DDX39A-214ENST00000590556 OR5AU1Q8NGC0 362 aa15.07■□□□□ 0
DDX39A-214ENST00000590556 GRPEL2Q8TAA5 225 aa15.07■□□□□ 0
DDX39A-214ENST00000590556 ZNF580Q9UK33 172 aa15.07■□□□□ 0
DDX39A-214ENST00000590556 WSB1Q9Y6I7 421 aa15.07■□□□□ 0
DDX39A-214ENST00000590556 UPK2O00526 184 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 ATG12O94817 140 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 SLC6A1P30531 599 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 MAS1LP35410 378 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 RPL8P62917 257 aaKnown RBP15.06■□□□□ 0
DDX39A-214ENST00000590556 SLC35B1P78383 322 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 SSBP2P81877 361 aaPredicted RBP15.06■□□□□ 0
DDX39A-214ENST00000590556 SRSF4Q08170 494 aaKnown RBP15.06■□□□□ 0
DDX39A-214ENST00000590556 TMEM128Q5BJH2 165 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 SLC25A42Q86VD7 318 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 WIPF2Q8TF74 440 aaPredicted RBP15.06■□□□□ 0
DDX39A-214ENST00000590556 GLYATL2Q8WU03 294 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 GALNT14Q96FL9 552 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 SEC22AQ96IW7 307 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 TSC22D3Q99576 134 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 FAM103A1Q9BTL3 118 aaKnown RBP15.06■□□□□ 0
DDX39A-214ENST00000590556 FLVCR2Q9UPI3 526 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 FBXO7Q9Y3I1 522 aa15.06■□□□□ 0
DDX39A-214ENST00000590556 TRAV3A0A0B4J244 114 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 TRAV41A0A0B4J266 112 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 FAM240BA0A1B0GVZ2 78 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 G3V318 75 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 CDS2O95674 445 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 IL6RP08887 468 aaPredicted RBP15.05■□□□□ -0
DDX39A-214ENST00000590556 EGR2P11161 476 aaPredicted RBP15.05■□□□□ -0
DDX39A-214ENST00000590556 ANXA3P12429 323 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 SUPT4H1P63272 117 aaKnown RBP15.05■□□□□ -0
DDX39A-214ENST00000590556 TMEM267Q0VDI3 215 aaPredicted RBP15.05■□□□□ -0
DDX39A-214ENST00000590556 ECSCRQ19T08 205 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 H2BFWTQ7Z2G1 175 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 ZNF329Q86UD4 541 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 CADM3Q8N126 398 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 SGMS2Q8NHU3 365 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 NUBP2Q9Y5Y2 271 aa15.05■□□□□ -0
DDX39A-214ENST00000590556 SNAPC5O75971 98 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 TCRBP04435 133 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 HLA-GP17693 338 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 VAMP1P23763 118 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 AKR1C2P52895 323 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 CRIP2P52943 208 aaPredicted RBP15.04■□□□□ -0
DDX39A-214ENST00000590556 DEFA1P59665 94 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 DEFA3P59666 94 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 UBE2MP61081 183 aaKnown RBP15.04■□□□□ -0
DDX39A-214ENST00000590556 TMEM187Q14656 261 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 SHISA2Q6UWI4 295 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 C10orf99Q6UWK7 81 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 ZNF695Q8IW36 515 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 C11orf44Q8N8P7 122 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 LFNGQ8NES3 379 aa15.04■□□□□ -0
DDX39A-214ENST00000590556 SRSF12Q8WXF0 261 aaKnown RBP15.04■□□□□ -0
DDX39A-214ENST00000590556 MSGN1A6NI15 193 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 FBXO24O75426 580 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 IGKV1-5P01602 117 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 CD28P10747 220 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 PPP1R1AQ13522 171 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 C10orf55Q5SWW7 151 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 TMEM268Q5VZI3 342 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 UNQ5815/PRO19632Q6UWF5 114 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 SELENOHQ8IZQ5 122 aaKnown RBP15.03■□□□□ -0
DDX39A-214ENST00000590556 OR4X2Q8NGF9 303 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 RNASE11Q8TAA1 199 aaKnown RBP15.03■□□□□ -0
DDX39A-214ENST00000590556 LHFPL5Q8TAF8 219 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 RBPMSQ93062 196 aaKnown RBP15.03■□□□□ -0
DDX39A-214ENST00000590556 TMEM56Q96MV1 263 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 PHB2Q99623 299 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 CITED1Q99966 193 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 C20orf85Q9H1P6 137 aa15.03■□□□□ -0
DDX39A-214ENST00000590556 PRR13Q9NZ81 148 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms