RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 VMO1Q7Z5L0 202 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 SBSPONQ8IVN8 264 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 FGFRL1Q8N441 504 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 OR51E1Q8TCB6 317 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 KLF14Q8TD94 323 aaPredicted RBP6.15□□□□□ -1.42
SMAD4-209ENST00000589941 HIST1H2BAQ96A08 127 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 GALNT14Q96FL9 552 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 ARHGAP5-AS1Q96IT6 56 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 YPEL4Q96NS1 127 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 GINS3Q9BRX5 216 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 ADAT1Q9BUB4 502 aaKnown RBP6.15□□□□□ -1.42
SMAD4-209ENST00000589941 PECRQ9BY49 303 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 BCL2L14Q9BZR8 327 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 SMDT1Q9H4I9 107 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 TAF9BQ9HBM6 251 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 TREM1Q9NP99 234 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 CENPMQ9NSP4 180 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 LIN7CQ9NUP9 197 aaKnown RBP6.15□□□□□ -1.42
SMAD4-209ENST00000589941 C1orf123Q9NWV4 160 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 METTL1Q9UBP6 276 aaKnown RBP6.15□□□□□ -1.42
SMAD4-209ENST00000589941 PPP1R3CQ9UQK1 317 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 C13orf42A0A1B0GVH6 325 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 ZNF726A6NNF4 738 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 IGHG1P01857 330 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 MT-ND4LP03901 98 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 SFTA3P0C7M3 94 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 ZNF43P17038 809 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 DTYMKP23919 212 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 RPL35P42766 123 aaKnown RBP6.14□□□□□ -1.43
SMAD4-209ENST00000589941 PTGFRP43088 359 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 KCNJ3P48549 501 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 NPY4RP50391 375 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 RAB5CP51148 216 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 AKR1C2P52895 323 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 BIDP55957 195 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 RAB5BP61020 215 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 ARF6P62330 175 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 AKR1C1Q04828 323 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 TBC1D28Q2M2D7 210 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 DHRS11Q6UWP2 260 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 ASCL4Q6XD76 172 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 FAM71E2Q8N5Q1 922 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 OR8G5Q8NG78 346 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 OR2Z1Q8NG97 314 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 HPSE2Q8WWQ2 592 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 PP6455Q8WZ26 134 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 TECTBQ96PL2 329 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 OR2V2Q96R30 315 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 ZNF251Q9BRH9 671 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 TCEAL7Q9BRU2 100 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 ULBP2Q9BZM5 246 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 C11orf1Q9H5F2 150 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 EDA2RQ9HAV5 297 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 GPR84Q9NQS5 396 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 ZNF319Q9P2F9 582 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 MIOXQ9UGB7 285 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 HSF4Q9ULV5 492 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 FAM96BQ9Y3D0 163 aa6.14□□□□□ -1.43
SMAD4-209ENST00000589941 STRAPQ9Y3F4 350 aaKnown RBP6.14□□□□□ -1.43
SMAD4-209ENST00000589941 MED6O75586 246 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 EIF3GO75821 320 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMAD4-209ENST00000589941 NR2C1P13056 603 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 CPT2P23786 658 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 RPL12P30050 165 aaKnown RBP6.13□□□□□ -1.43
SMAD4-209ENST00000589941 SAA4P35542 130 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 SNCAP37840 140 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 P2RY1P47900 373 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 SNU13P55769 128 aaKnown RBP6.13□□□□□ -1.43
SMAD4-209ENST00000589941 RHEBQ15382 184 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 ZNF561Q8N587 486 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 CSNK2A3Q8NEV1 391 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 OR2AJ1Q8NGZ0 328 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 OR5R1Q8NH85 324 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 TMEM54Q969K7 222 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 LYZL4Q96KX0 146 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 OXGR1Q96P68 337 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 CMSS1Q9BQ75 279 aaKnown RBP6.13□□□□□ -1.43
SMAD4-209ENST00000589941 CHST5Q9GZS9 411 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 SIRT7Q9NRC8 400 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 MSRB1Q9NZV6 116 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 FBXL17Q9UF56 701 aa6.13□□□□□ -1.43
SMAD4-209ENST00000589941 C14orf166Q9Y224 244 aaKnown RBP6.13□□□□□ -1.43
SMAD4-209ENST00000589941 LOC100509620A0A075B734 347 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 A0A1W2PP11 408 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 C1orf196B1AJZ1 125 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 E5RGE8 158 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 K7EPK0 472 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 TIMM8AO60220 97 aaPredicted RBP6.12□□□□□ -1.43
SMAD4-209ENST00000589941 DHRS3O75911 302 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 CCNOP22674 350 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 ANOS1P23352 680 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 GLRA1P23415 457 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 NFYBP25208 207 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 CHATP28329 748 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 FCGR2CP31995 323 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 PSG7Q13046 419 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 ENDOGQ14249 297 aaKnown RBP6.12□□□□□ -1.43
SMAD4-209ENST00000589941 IL13RA2Q14627 380 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 TMEM187Q14656 261 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 KISS1Q15726 138 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms