RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 IGKV1-5P01602 117 aa12.06□□□□□ -0.48
ATG4D-211ENST00000589753 CRYBA1P05813 215 aa12.06□□□□□ -0.48
ATG4D-211ENST00000589753 LIN54Q6MZP7 749 aa12.06□□□□□ -0.48
ATG4D-211ENST00000589753 H2BFWTQ7Z2G1 175 aa12.06□□□□□ -0.48
ATG4D-211ENST00000589753 CADM3Q8N126 398 aa12.06□□□□□ -0.48
ATG4D-211ENST00000589753 OR4A5Q8NH83 315 aa12.06□□□□□ -0.48
ATG4D-211ENST00000589753 RRNAD1Q96FB5 475 aaKnown RBP12.06□□□□□ -0.48
ATG4D-211ENST00000589753 CLCC1Q96S66 551 aa12.06□□□□□ -0.48
ATG4D-211ENST00000589753 SHPKQ9UHJ6 478 aa12.06□□□□□ -0.48
ATG4D-211ENST00000589753 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
ATG4D-211ENST00000589753 SH2D7A6NKC9 451 aaPredicted RBP12.05□□□□□ -0.48
ATG4D-211ENST00000589753 SNRPGP15A8MWD9 76 aa12.05□□□□□ -0.48
ATG4D-211ENST00000589753 CREBL2O60519 120 aaPredicted RBP12.05□□□□□ -0.48
ATG4D-211ENST00000589753 HLA-DRB1P01911 266 aa12.05□□□□□ -0.48
ATG4D-211ENST00000589753 IL6RP08887 468 aaPredicted RBP12.05□□□□□ -0.48
ATG4D-211ENST00000589753 BLCAPP62952 87 aa12.05□□□□□ -0.48
ATG4D-211ENST00000589753 SRSF2Q01130 221 aaKnown RBP12.05□□□□□ -0.48
ATG4D-211ENST00000589753 TATDN3Q17R31 274 aa12.05□□□□□ -0.48
ATG4D-211ENST00000589753 C9orf152Q5JTZ5 239 aa12.05□□□□□ -0.48
ATG4D-211ENST00000589753 LYZL2Q7Z4W2 148 aa12.05□□□□□ -0.48
ATG4D-211ENST00000589753 FAM219AQ8IW50 185 aa12.05□□□□□ -0.48
ATG4D-211ENST00000589753 C12orf45Q8N5I9 185 aaPredicted RBP12.05□□□□□ -0.48
ATG4D-211ENST00000589753 TMEM167AQ8TBQ9 72 aa12.05□□□□□ -0.48
ATG4D-211ENST00000589753 RANBP3Q9H6Z4 567 aaPredicted RBP12.05□□□□□ -0.48
ATG4D-211ENST00000589753 MMP24Q9Y5R2 645 aa12.05□□□□□ -0.48
ATG4D-211ENST00000589753 A0A0B4J293 547 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 UPK2O00526 184 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 FCN1O00602 326 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 CA2P00918 260 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 OR9G9P0C7N8 305 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 P0C879 139 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 VDAC1P21796 283 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 PJVKQ0ZLH3 352 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 PRSS8Q16651 343 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 MRGPRG-AS1Q2M3A8 158 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 MMD2Q8IY49 270 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 UXS1Q8NBZ7 420 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 LSM10Q969L4 123 aaKnown RBP12.04□□□□□ -0.48
ATG4D-211ENST00000589753 PRSS22Q9GZN4 317 aa12.04□□□□□ -0.48
ATG4D-211ENST00000589753 ZNF430Q9H8G1 570 aaPredicted RBP12.04□□□□□ -0.48
ATG4D-211ENST00000589753 TRAV3A0A0B4J244 114 aa12.03□□□□□ -0.48
ATG4D-211ENST00000589753 A0A0G2JRQ6 117 aa12.03□□□□□ -0.48
ATG4D-211ENST00000589753 C7orf66A4D0T2 115 aa12.03□□□□□ -0.48
ATG4D-211ENST00000589753 SNAPC5O75971 98 aa12.03□□□□□ -0.48
ATG4D-211ENST00000589753 HOXB5P09067 269 aa12.03□□□□□ -0.48
ATG4D-211ENST00000589753 RPL8P62917 257 aaKnown RBP12.03□□□□□ -0.48
ATG4D-211ENST00000589753 OR4A16Q8NH70 328 aa12.03□□□□□ -0.48
ATG4D-211ENST00000589753 HSPB9Q9BQS6 159 aa12.03□□□□□ -0.48
ATG4D-211ENST00000589753 TMED3Q9Y3Q3 217 aa12.03□□□□□ -0.48
ATG4D-211ENST00000589753 ALG5Q9Y673 324 aa12.03□□□□□ -0.48
ATG4D-211ENST00000589753 ZFHX3Q15911 3703 aa12.02□□□□□ -0.48
ATG4D-211ENST00000589753 IGHV7-81A0A0B4J1V7 117 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 DBX1A6NMT0 343 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 ADAP1O75689 374 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 ACTL6BO94805 426 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 IFNA21P01568 189 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 FGF2P09038 288 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 MAS1LP35410 378 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 GNB1P62873 340 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 CX3CL1P78423 397 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 RELBQ01201 579 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 TNXAQ16473 311 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 IZUMO4Q1ZYL8 232 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 NMSQ5H8A3 153 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 ZNF562Q6V9R5 426 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 Q6ZS46 218 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 PRIMA1Q86XR5 153 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 GPR146Q96CH1 333 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 ZNF702PQ9H963 129 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 PRNDQ9UKY0 176 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 NSG2Q9Y328 171 aa12.02□□□□□ -0.49
ATG4D-211ENST00000589753 KCNAB3O43448 404 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 RBMXL2O75526 392 aaKnown RBP12.01□□□□□ -0.49
ATG4D-211ENST00000589753 TSPAN9O75954 239 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 CNIH1O95406 144 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 IGHG2P01859 326 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 HLA-GP17693 338 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 OR2B8PP59922 312 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 FXYD3Q14802 87 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 ARSJQ5FYB0 599 aaPredicted RBP12.01□□□□□ -0.49
ATG4D-211ENST00000589753 GGNBP1Q5YKI7 109 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 Q6ZRM9 215 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 Q6ZSV7 163 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 SLC35E3Q7Z769 313 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 COMMD5Q9GZQ3 224 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 OR51J1Q9H342 316 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 CACNG5Q9UF02 275 aa12.01□□□□□ -0.49
ATG4D-211ENST00000589753 A0A1B0GU03 582 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 C15orf61A6NNL5 157 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 SSNA1O43805 119 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 SULT1A3P0DMM9 295 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 SULT1A4P0DMN0 295 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 COMPP49747 757 aaPredicted RBP12□□□□□ -0.49
ATG4D-211ENST00000589753 SSBP2P81877 361 aaPredicted RBP12□□□□□ -0.49
ATG4D-211ENST00000589753 SMCO1Q147U7 214 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 THOC7Q6I9Y2 204 aaKnown RBP12□□□□□ -0.49
ATG4D-211ENST00000589753 FOXRED2Q8IWF2 684 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 Q8N2B8 174 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 OR2T6Q8NHC8 308 aa12□□□□□ -0.49
ATG4D-211ENST00000589753 ABHD5Q8WTS1 349 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms