RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 A0A0B4J2A0 478 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 PIGBOS1A0A0B4J2F0 54 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 KBTBD11O94819 623 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 P0C879 139 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 AKR1C2P52895 323 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 BLCAPP62952 87 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 PLGLAQ15195 96 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 MRGPRG-AS1Q2M3A8 158 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 LIN54Q6MZP7 749 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 LYZL2Q7Z4W2 148 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 TMEM167AQ8TBQ9 72 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 SHPKQ9UHJ6 478 aa12.62□□□□□ -0.39
CSNK1D-212ENST00000580061 NF1P21359 2839 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 TNCP24821 2201 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 TET2Q6N021 2002 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 A0A0G2JRQ6 117 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 DUXBA0A1W2PPF3 345 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 C7orf66A4D0T2 115 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 SH2D7A6NKC9 451 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 SNRPGP15A8MWD9 76 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 FCN1O00602 326 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 CREBL2O60519 120 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 HLA-DRB1P01911 266 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 VDAC1P21796 283 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 SRSF2Q01130 221 aaKnown RBP12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 TATDN3Q17R31 274 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 H2BFWTQ7Z2G1 175 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 OR4A5Q8NH83 315 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 LSM10Q969L4 123 aaKnown RBP12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 RRNAD1Q96FB5 475 aaKnown RBP12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 CLCC1Q96S66 551 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 PHB2Q99623 299 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 NPFFR1Q9GZQ6 430 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 MMP24Q9Y5R2 645 aa12.61□□□□□ -0.39
CSNK1D-212ENST00000580061 TRAV3A0A0B4J244 114 aa12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 UPK2O00526 184 aa12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 CA2P00918 260 aa12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 OR9G9P0C7N8 305 aa12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 PJVKQ0ZLH3 352 aa12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 PRSS8Q16651 343 aa12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 Q6ZS46 218 aa12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 FAM219AQ8IW50 185 aa12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 MMD2Q8IY49 270 aa12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 C12orf45Q8N5I9 185 aaPredicted RBP12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 RNASE11Q8TAA1 199 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 RANBP3Q9H6Z4 567 aaPredicted RBP12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 ZNF430Q9H8G1 570 aaPredicted RBP12.6□□□□□ -0.39
CSNK1D-212ENST00000580061 IGHV7-81A0A0B4J1V7 117 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 DBX1A6NMT0 343 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 CRYBA1P05813 215 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 HOXB5P09067 269 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 SSBP2P81877 361 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 RELBQ01201 579 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 IZUMO4Q1ZYL8 232 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 NMSQ5H8A3 153 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 PRIMA1Q86XR5 153 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 GPR146Q96CH1 333 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 HSPB9Q9BQS6 159 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 PRSS22Q9GZN4 317 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 TMED3Q9Y3Q3 217 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 ALG5Q9Y673 324 aa12.59□□□□□ -0.39
CSNK1D-212ENST00000580061 ADAP1O75689 374 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 TSPAN9O75954 239 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 SNAPC5O75971 98 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 IGHG2P01859 326 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 FGF2P09038 288 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 RPL8P62917 257 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 CX3CL1P78423 397 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 C9orf152Q5JTZ5 239 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 ZNF562Q6V9R5 426 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 Q6ZRM9 215 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 Q6ZSV7 163 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 UXS1Q8NBZ7 420 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 TAF15Q92804 592 aaKnown RBP eCLIP12.58□□□□□ -0.46e-6■■□□□ 12.5
CSNK1D-212ENST00000580061 ZNF702PQ9H963 129 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 NSG2Q9Y328 171 aa12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 SETD2Q9BYW2 2564 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-212ENST00000580061 C15orf61A6NNL5 157 aa12.57□□□□□ -0.4
CSNK1D-212ENST00000580061 HLA-GP17693 338 aa12.57□□□□□ -0.4
CSNK1D-212ENST00000580061 MAS1LP35410 378 aa12.57□□□□□ -0.4
CSNK1D-212ENST00000580061 OR2B8PP59922 312 aa12.57□□□□□ -0.4
CSNK1D-212ENST00000580061 GNB1P62873 340 aa12.57□□□□□ -0.4
CSNK1D-212ENST00000580061 NDPQ00604 133 aa12.57□□□□□ -0.4
CSNK1D-212ENST00000580061 TNXAQ16473 311 aa12.57□□□□□ -0.4
CSNK1D-212ENST00000580061 GGNBP1Q5YKI7 109 aa12.57□□□□□ -0.4
CSNK1D-212ENST00000580061 Q8N2B8 174 aa12.57□□□□□ -0.4
CSNK1D-212ENST00000580061 OR4A16Q8NH70 328 aa12.57□□□□□ -0.4
CSNK1D-212ENST00000580061 OR51J1Q9H342 316 aa12.57□□□□□ -0.4
CSNK1D-212ENST00000580061 JMJD1CQ15652 2540 aa12.56□□□□□ -0.4
CSNK1D-212ENST00000580061 LINC01548A6NM66 108 aa12.56□□□□□ -0.4
CSNK1D-212ENST00000580061 KCNAB3O43448 404 aa12.56□□□□□ -0.4
CSNK1D-212ENST00000580061 ACTL6BO94805 426 aa12.56□□□□□ -0.4
CSNK1D-212ENST00000580061 IFNA21P01568 189 aa12.56□□□□□ -0.4
CSNK1D-212ENST00000580061 MYOD1P15172 320 aa12.56□□□□□ -0.4
CSNK1D-212ENST00000580061 COMPP49747 757 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-212ENST00000580061 FXYD3Q14802 87 aa12.56□□□□□ -0.4
CSNK1D-212ENST00000580061 SLC35E3Q7Z769 313 aa12.56□□□□□ -0.4
CSNK1D-212ENST00000580061 FOXRED2Q8IWF2 684 aa12.56□□□□□ -0.4
CSNK1D-212ENST00000580061 TMEM14BQ9NUH8 114 aa12.56□□□□□ -0.4
CSNK1D-212ENST00000580061 FKBP11Q9NYL4 201 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms