RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TCF19Q9Y242 345 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 NBASA2RRP1 2371 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 ZFP92A6NM28 416 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 SIAH2O43255 324 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 IGKV1-16P04430 117 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 HSPB1P04792 205 aaKnown RBP11.5□□□□□ -0.57
VPS33B-208ENST00000574755 C1QTNF9P0C862 333 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 VDAC2P45880 294 aaPredicted RBP11.5□□□□□ -0.57
VPS33B-208ENST00000574755 CDSNQ15517 529 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 ACSM6Q6P461 480 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 ZNF709Q8N972 641 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 KAAG1Q9UBP8 84 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 CHD8Q9HCK8 2581 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 MAP1LC3B2A6NCE7 125 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 RRHO14718 337 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 IGKV1D-33P01593 117 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 IGKV1-33P01594 117 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 SRP19P09132 144 aaKnown RBP11.49□□□□□ -0.57
VPS33B-208ENST00000574755 FBP1P09467 338 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 CD1BP29016 333 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 KHDC3LQ587J8 217 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 RPP25LQ8N5L8 163 aaKnown RBP11.49□□□□□ -0.57
VPS33B-208ENST00000574755 OR13D1Q8NGV5 346 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 MAP1LC3BQ9GZQ8 125 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 TMEM14BQ9NUH8 114 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 PUS1Q9Y606 427 aaKnown RBP eCLIP11.49□□□□□ -0.57
VPS33B-208ENST00000574755 C7orf77A4D0Y5 90 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 NDUFA2O43678 99 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 LOXP28300 417 aaPredicted RBP11.49□□□□□ -0.57
VPS33B-208ENST00000574755 FFAR4Q5NUL3 377 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 ZNF833PQ6ZTB9 187 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 ABHD12Q8N2K0 398 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 CYB561D1Q8N8Q1 229 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 RAB39BQ96DA2 213 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 SMCO4Q9NRQ5 59 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 SLC39A9Q9NUM3 307 aa11.49□□□□□ -0.57
VPS33B-208ENST00000574755 FOXA2Q9Y261 457 aaPredicted RBP11.49□□□□□ -0.57
VPS33B-208ENST00000574755 LRBAP50851 2863 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 LOC102723971A0A1B0GUV8 181 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 SMCO3A2RU48 225 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 C17orf112F2Z3M2 114 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 H7C2Y5 167 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 EIF3GO75821 320 aaKnown RBP eCLIP11.48□□□□□ -0.57
VPS33B-208ENST00000574755 MBP02144 154 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 POU2AF1Q16633 256 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 HSPE1P61604 102 aaKnown RBP11.48□□□□□ -0.57
VPS33B-208ENST00000574755 ZNF672Q499Z4 452 aaPredicted RBP11.48□□□□□ -0.57
VPS33B-208ENST00000574755 OR10G4Q8NGN3 311 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 OR10G9Q8NGN4 311 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 OR10G7Q8NGN6 311 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 OR10X1Q8NGY0 326 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 LHX4Q969G2 390 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 MRPL20Q9BYC9 149 aaKnown RBP11.48□□□□□ -0.57
VPS33B-208ENST00000574755 SLC25A22Q9H936 323 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
VPS33B-208ENST00000574755 LYNX1G3V0Z9 82 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 IFNA4P05014 189 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 LYNX1P0DP58 116 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 BCL2P10415 239 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 MDKP21741 143 aaPredicted RBP11.47□□□□□ -0.57
VPS33B-208ENST00000574755 RAB11AP62491 216 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 RHEBQ15382 184 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 HINT2Q9BX68 163 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 OR51B2Q9Y5P1 312 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 NCOR2Q9Y618 2525 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 HMGB3O15347 200 aaKnown RBP11.47□□□□□ -0.57
VPS33B-208ENST00000574755 APOA2P02652 100 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 REG1BP48304 166 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 LY6DQ14210 128 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 PRNDQ9UKY0 176 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 WDR83OSQ9Y284 106 aa11.47□□□□□ -0.57
VPS33B-208ENST00000574755 COL6A6A6NMZ7 2263 aa11.46□□□□□ -0.57
VPS33B-208ENST00000574755 SRRM4A7MD48 611 aaKnown RBP11.46□□□□□ -0.57
VPS33B-208ENST00000574755 MYOD1P15172 320 aa11.46□□□□□ -0.57
VPS33B-208ENST00000574755 PLA2G5P39877 138 aa11.46□□□□□ -0.57
VPS33B-208ENST00000574755 SLC24A4Q8NFF2 622 aa11.46□□□□□ -0.57
VPS33B-208ENST00000574755 CTXND1A0A1B0GTU2 59 aa11.46□□□□□ -0.58
VPS33B-208ENST00000574755 H3BQ15 152 aa11.46□□□□□ -0.58
VPS33B-208ENST00000574755 J3QR06 171 aa11.46□□□□□ -0.58
VPS33B-208ENST00000574755 IFNA1P01562 189 aa11.46□□□□□ -0.58
VPS33B-208ENST00000574755 COL8A2P25067 703 aa11.46□□□□□ -0.58
VPS33B-208ENST00000574755 TMEM155Q4W5P6 130 aa11.46□□□□□ -0.58
VPS33B-208ENST00000574755 TMEM170AQ8WVE7 144 aa11.46□□□□□ -0.58
VPS33B-208ENST00000574755 GGACTQ9BVM4 153 aa11.46□□□□□ -0.58
VPS33B-208ENST00000574755 TPRP12270 2363 aaKnown RBP11.45□□□□□ -0.58
VPS33B-208ENST00000574755 PRSS46E5RG02 174 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 UPK2O00526 184 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 OPN1MWP04001 364 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 SAA1P0DJI8 122 aaPredicted RBP11.45□□□□□ -0.58
VPS33B-208ENST00000574755 OPN1MW2P0DN77 364 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 OPN1MW3P0DN78 364 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 NPY1RP25929 384 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 FAM122CQ6P4D5 195 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 TREML4Q6UXN2 200 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 OSR1Q8TAX0 266 aaPredicted RBP11.45□□□□□ -0.58
VPS33B-208ENST00000574755 HARBI1Q96MB7 349 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 ACTR3CQ9C0K3 210 aaPredicted RBP11.45□□□□□ -0.58
VPS33B-208ENST00000574755 MLXQ9UH92 298 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 H0YJW9 148 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 MPDU1O75352 247 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms