RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 MARCH11A6NNE9 402 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 RBMXL2O75526 392 aaKnown RBP12.73□□□□□ -0.37
USB1-215ENST00000569252 SFT2D2O95562 160 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 CDS2O95674 445 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 HLA-AP01891 365 aaKnown RBP12.73□□□□□ -0.37
USB1-215ENST00000569252 G6PCP35575 357 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 GNB1P62873 340 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 PPP1R1AQ13522 171 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 FOXRED2Q8IWF2 684 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 MMD2Q8IY49 270 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 FAM71E2Q8N5Q1 922 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 ABHD5Q8WTS1 349 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 GLYATL2Q8WU03 294 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 TMEM230Q96A57 120 aa12.73□□□□□ -0.37
USB1-215ENST00000569252 GPN1Q9HCN4 374 aaPredicted RBP12.73□□□□□ -0.37
USB1-215ENST00000569252 INMT-MINDY4F8WBC2 141 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 IGLV2-23P01705 113 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 SAA1P0DJI8 122 aaPredicted RBP12.72□□□□□ -0.37
USB1-215ENST00000569252 VSIG10L2P0DP72 767 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 VDAC2P45880 294 aaPredicted RBP12.72□□□□□ -0.37
USB1-215ENST00000569252 RAG2P55895 527 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 FOXL1Q12952 345 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 TMEM187Q14656 261 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 FBLN7Q53RD9 439 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 TMEM268Q5VZI3 342 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 OR4A47Q6IF82 309 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 SLC35E3Q7Z769 313 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 OR4A16Q8NH70 328 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 RBPMSQ93062 196 aaKnown RBP12.72□□□□□ -0.37
USB1-215ENST00000569252 IL22RA2Q969J5 263 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 TMEM140Q9NV12 185 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 FKBP11Q9NYL4 201 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 BET1LQ9NYM9 111 aa12.72□□□□□ -0.37
USB1-215ENST00000569252 A0A1B0GUS0 222 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 C9orf170A2RU37 121 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 TSPAN9O75954 239 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 KBTBD11O94819 623 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 NDUFA7O95182 113 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 HLA-DRB1P01911 266 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 HKR1P10072 659 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 MAS1LP35410 378 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 DEFA6Q01524 100 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 TMEM267Q0VDI3 215 aaPredicted RBP12.71□□□□□ -0.37
USB1-215ENST00000569252 POU2AF1Q16633 256 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 ZNF562Q6V9R5 426 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 Q6ZSV7 163 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 LYG2Q86SG7 212 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 SGMS2Q8NHU3 365 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 TMEM56Q96MV1 263 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 PHB2Q99623 299 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 GON7Q9BXV9 100 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 TMEM56-RWDD3S4R434 201 aa12.71□□□□□ -0.37
USB1-215ENST00000569252 SH2D7A6NKC9 451 aaPredicted RBP12.7□□□□□ -0.38
USB1-215ENST00000569252 PRAF2O60831 178 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 CA2P00918 260 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 IFNA21P01568 189 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 AMY1AP04745 511 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 CRYGBP07316 175 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 RPL8P62917 257 aaKnown RBP12.7□□□□□ -0.38
USB1-215ENST00000569252 SUPT4H1P63272 117 aaKnown RBP12.7□□□□□ -0.38
USB1-215ENST00000569252 DHRS2Q13268 280 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 FXYD3Q14802 87 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 TNXAQ16473 311 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 PRSS8Q16651 343 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 FAM219AQ8IW50 185 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 SELENOHQ8IZQ5 122 aaKnown RBP12.7□□□□□ -0.38
USB1-215ENST00000569252 PUSL1Q8N0Z8 303 aaKnown RBP12.7□□□□□ -0.38
USB1-215ENST00000569252 CADM3Q8N126 398 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 TMEM167AQ8TBQ9 72 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 COMMD5Q9GZQ3 224 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 C16orf95Q9H693 158 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 NOTCH1P46531 2555 aa12.7□□□□□ -0.38
USB1-215ENST00000569252 DUXBA0A1W2PPF3 345 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 AP4M1O00189 453 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 UPK2O00526 184 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 FCN1O00602 326 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 DUS4LO95620 317 aaKnown RBP12.69□□□□□ -0.38
USB1-215ENST00000569252 IGHG2P01859 326 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 IL5P05113 134 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 CENPVQ7Z7K6 275 aaPredicted RBP12.69□□□□□ -0.38
USB1-215ENST00000569252 UXS1Q8NBZ7 420 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 SEC22AQ96IW7 307 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 MARVELD1Q9BSK0 173 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 PDCD10Q9BUL8 212 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 OR51J1Q9H342 316 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 ZNF430Q9H8G1 570 aaPredicted RBP12.69□□□□□ -0.38
USB1-215ENST00000569252 PARP11Q9NR21 331 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 PRNDQ9UKY0 176 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 MMP24Q9Y5R2 645 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 VWFP04275 2813 aa12.69□□□□□ -0.38
USB1-215ENST00000569252 A0A0B4J2A0 478 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 IGKV1-39P01597 117 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 IGKV1D-39P04432 117 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 HLA-GP17693 338 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 VDAC1P21796 283 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 MECP2P51608 486 aaKnown RBP12.68□□□□□ -0.38
USB1-215ENST00000569252 SLC35B1P78383 322 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 CX3CL1P78423 397 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 PDLIM3Q53GG5 364 aaPredicted RBP12.68□□□□□ -0.38
USB1-215ENST00000569252 ZNF431Q8TF32 576 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms