RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TNFSF12O43508 249 aa17.97■□□□□ 0.47
RAB40C-209ENST00000565511 ACTL6BO94805 426 aa17.97■□□□□ 0.47
RAB40C-209ENST00000565511 IGHV3-23P01764 117 aa17.97■□□□□ 0.47
RAB40C-209ENST00000565511 AREGP15514 252 aa17.97■□□□□ 0.47
RAB40C-209ENST00000565511 C15orf32Q32M92 178 aa17.97■□□□□ 0.47
RAB40C-209ENST00000565511 ZFAND6Q6FIF0 208 aa17.97■□□□□ 0.47
RAB40C-209ENST00000565511 SSX9Q7RTT3 188 aa17.97■□□□□ 0.47
RAB40C-209ENST00000565511 TMEM167AQ8TBQ9 72 aa17.97■□□□□ 0.47
RAB40C-209ENST00000565511 HSD17B10Q99714 261 aaKnown RBP17.97■□□□□ 0.47
RAB40C-209ENST00000565511 SELENOKQ9Y6D0 94 aa17.97■□□□□ 0.47
RAB40C-209ENST00000565511 S4R3C0 116 aa17.97■□□□□ 0.47
RAB40C-209ENST00000565511 LOC100506127A0A0U1RQW1 187 aa17.96■□□□□ 0.47
RAB40C-209ENST00000565511 SCGNO76038 276 aa17.96■□□□□ 0.47
RAB40C-209ENST00000565511 SLC22A5O76082 557 aa17.96■□□□□ 0.47
RAB40C-209ENST00000565511 RPL27AP46776 148 aaKnown RBP17.96■□□□□ 0.47
RAB40C-209ENST00000565511 LCN12Q6JVE5 192 aa17.96■□□□□ 0.47
RAB40C-209ENST00000565511 Q8N402 240 aa17.96■□□□□ 0.47
RAB40C-209ENST00000565511 NECAP1Q8NC96 275 aa17.96■□□□□ 0.47
RAB40C-209ENST00000565511 BEST4Q8NFU0 473 aa17.96■□□□□ 0.47
RAB40C-209ENST00000565511 FANCD2OSQ96PS1 177 aa17.96■□□□□ 0.47
RAB40C-209ENST00000565511 FYTTD1Q96QD9 318 aaKnown RBP17.96■□□□□ 0.47
RAB40C-209ENST00000565511 OR2A7Q96R45 310 aa17.96■□□□□ 0.47
RAB40C-209ENST00000565511 RETNQ9HD89 108 aa17.96■□□□□ 0.47
RAB40C-209ENST00000565511 CREBL2O60519 120 aaPredicted RBP17.95■□□□□ 0.46
RAB40C-209ENST00000565511 NDUFB8O95169 186 aa17.95■□□□□ 0.46
RAB40C-209ENST00000565511 ZNF735P0CB33 412 aa17.95■□□□□ 0.46
RAB40C-209ENST00000565511 LYL1P12980 280 aa17.95■□□□□ 0.46
RAB40C-209ENST00000565511 TGFBR1P36897 503 aa17.95■□□□□ 0.46
RAB40C-209ENST00000565511 CD300EQ496F6 205 aaPredicted RBP17.95■□□□□ 0.46
RAB40C-209ENST00000565511 IDNKQ5T6J7 187 aa17.95■□□□□ 0.46
RAB40C-209ENST00000565511 SECTM1Q8WVN6 248 aa17.95■□□□□ 0.46
RAB40C-209ENST00000565511 CCDC140Q96MF4 163 aa17.95■□□□□ 0.46
RAB40C-209ENST00000565511 YTHDF1Q9BYJ9 559 aaKnown RBP17.95■□□□□ 0.46
RAB40C-209ENST00000565511 WFDC10AQ9H1F0 79 aa17.95■□□□□ 0.46
RAB40C-209ENST00000565511 ZNF257Q9Y2Q1 563 aa17.95■□□□□ 0.46
RAB40C-209ENST00000565511 NPIPB5A8MRT5 1133 aa17.94■□□□□ 0.46
RAB40C-209ENST00000565511 FCGR2CP31995 323 aa17.94■□□□□ 0.46
RAB40C-209ENST00000565511 NEDD8Q15843 81 aa17.94■□□□□ 0.46
RAB40C-209ENST00000565511 TATDN3Q17R31 274 aa17.94■□□□□ 0.46
RAB40C-209ENST00000565511 ZNF66Q6ZN08 573 aa17.94■□□□□ 0.46
RAB40C-209ENST00000565511 HOGA1Q86XE5 327 aa17.94■□□□□ 0.46
RAB40C-209ENST00000565511 OR13F1Q8NGS4 319 aa17.94■□□□□ 0.46
RAB40C-209ENST00000565511 PLEKHA3Q9HB20 300 aa17.94■□□□□ 0.46
RAB40C-209ENST00000565511 FBXL7Q9UJT9 491 aa17.94■□□□□ 0.46
RAB40C-209ENST00000565511 ETV7Q9Y603 341 aa17.94■□□□□ 0.46
RAB40C-209ENST00000565511 ZNF785A8K8V0 405 aa17.93■□□□□ 0.46
RAB40C-209ENST00000565511 REG1AP05451 166 aa17.93■□□□□ 0.46
RAB40C-209ENST00000565511 ARPC4P59998 168 aa17.93■□□□□ 0.46
RAB40C-209ENST00000565511 AUNIPQ9H7T9 357 aa17.93■□□□□ 0.46
RAB40C-209ENST00000565511 SLC2A9Q9NRM0 540 aa17.93■□□□□ 0.46
RAB40C-209ENST00000565511 PEMTQ9UBM1 199 aa17.93■□□□□ 0.46
RAB40C-209ENST00000565511 TRAV3A0A0B4J244 114 aa17.92■□□□□ 0.46
RAB40C-209ENST00000565511 MEIS3P1A6NDR6 274 aa17.92■□□□□ 0.46
RAB40C-209ENST00000565511 C2orf70A6NJV1 201 aa17.92■□□□□ 0.46
RAB40C-209ENST00000565511 OR2C1O95371 312 aa17.92■□□□□ 0.46
RAB40C-209ENST00000565511 PPYP01298 95 aa17.92■□□□□ 0.46
RAB40C-209ENST00000565511 CD7P09564 240 aa17.92■□□□□ 0.46
RAB40C-209ENST00000565511 TIMM50Q3ZCQ8 353 aa17.92■□□□□ 0.46
RAB40C-209ENST00000565511 GTSCR1Q86UQ5 136 aa17.92■□□□□ 0.46
RAB40C-209ENST00000565511 CACNG8Q8WXS5 425 aa17.92■□□□□ 0.46
RAB40C-209ENST00000565511 SPATA25Q9BR10 227 aa17.92■□□□□ 0.46
RAB40C-209ENST00000565511 Q9H521 79 aa17.92■□□□□ 0.46
RAB40C-209ENST00000565511 CRYGCP07315 174 aa17.91■□□□□ 0.46
RAB40C-209ENST00000565511 CD81P60033 236 aa17.91■□□□□ 0.46
RAB40C-209ENST00000565511 DEFB114Q30KQ6 69 aa17.91■□□□□ 0.46
RAB40C-209ENST00000565511 OR4A47Q6IF82 309 aa17.91■□□□□ 0.46
RAB40C-209ENST00000565511 LINC00322Q6ZN03 302 aaPredicted RBP17.91■□□□□ 0.46
RAB40C-209ENST00000565511 SLC25A42Q86VD7 318 aa17.91■□□□□ 0.46
RAB40C-209ENST00000565511 VSTM2AQ8TAG5 236 aa17.91■□□□□ 0.46
RAB40C-209ENST00000565511 SULT1C2O00338 296 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 AIREO43918 545 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 CTRB1P17538 263 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 HLA-GP17693 338 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 PSMB6P28072 239 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 MAS1LP35410 378 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 SCAND1P57086 179 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 FXYD4P59646 89 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 RPL8P62917 257 aaKnown RBP17.9■□□□□ 0.46
RAB40C-209ENST00000565511 KLK9Q2XQG4 91 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 CTRB2Q6GPI1 263 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 SPAG16Q8N0X2 631 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 OR2K2Q8NGT1 345 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 TUBA4BQ9H853 241 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 KLK9Q9UKQ9 250 aa17.9■□□□□ 0.46
RAB40C-209ENST00000565511 MFSD2BA6NFX1 497 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 FOLR2P14207 255 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 MSMO1Q15800 293 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 CLEC19AQ6UXS0 136 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 ZNF818PQ6ZRF7 136 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 DEFB125Q8N687 156 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 DYNLRB2Q8TF09 96 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 ISOC1Q96CN7 298 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 WDR89Q96FK6 387 aaPredicted RBP17.89■□□□□ 0.45
RAB40C-209ENST00000565511 FAM110AQ9BQ89 295 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 NEURL2Q9BR09 285 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 SLC5A7Q9GZV3 580 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 PALMDQ9NP74 551 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 BET1LQ9NYM9 111 aa17.89■□□□□ 0.45
RAB40C-209ENST00000565511 IGLV11-55A0A075B6I3 123 aa17.88■□□□□ 0.45
RAB40C-209ENST00000565511 DPPA5A6NC42 116 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms