RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 PEA15Q15121 130 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 NMSQ5H8A3 153 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 LINC01356Q8N9X3 169 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 MAPK1IP1LQ8NDC0 245 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 LSM10Q969L4 123 aaKnown RBP9.1□□□□□ -0.95
USP3-218ENST00000560202 NMES1Q9C002 83 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 PLEKHA2Q9HB19 425 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 SMCO4Q9NRQ5 59 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 GSKIPQ9P0R6 139 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 UNC79Q9P2D8 2635 aa9.1□□□□□ -0.95
USP3-218ENST00000560202 TRAV20A0A0B4J274 112 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 A0A0G2JRQ6 117 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 A0A1W2PRD5 423 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 A0A1W2PRF3 423 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 A0A1W2PRM7 423 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 C5orf52A6NGY3 159 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 KRASP01116 189 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 IGKV1-5P01602 117 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 GAPDHP04406 335 aaKnown RBP9.09□□□□□ -0.95
USP3-218ENST00000560202 CRYBA1P05813 215 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 TPT1P13693 172 aaKnown RBP9.09□□□□□ -0.95
USP3-218ENST00000560202 UBE2E1P51965 193 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 AKR1C2P52895 323 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 LDLRAD2Q5SZI1 272 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 INO80EQ8NBZ0 244 aaPredicted RBP9.09□□□□□ -0.95
USP3-218ENST00000560202 OR5AN1Q8NGI8 311 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 OR4S2Q8NH73 311 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 RNASE11Q8TAA1 199 aaKnown RBP9.09□□□□□ -0.95
USP3-218ENST00000560202 LHX4Q969G2 390 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 RPEQ96AT9 228 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 SAT2Q96F10 170 aaPredicted RBP9.09□□□□□ -0.95
USP3-218ENST00000560202 RRNAD1Q96FB5 475 aaKnown RBP9.09□□□□□ -0.95
USP3-218ENST00000560202 SPIN2AQ99865 258 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 FOXC2Q99958 501 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 SPIN2BQ9BPZ2 258 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 ZNF471Q9BX82 626 aaPredicted RBP9.09□□□□□ -0.95
USP3-218ENST00000560202 TUBA4BQ9H853 241 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 SLC35D1Q9NTN3 355 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 HIF1ANQ9NWT6 349 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 DPM3Q9P2X0 92 aa9.09□□□□□ -0.95
USP3-218ENST00000560202 H0YJW9 148 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 TXNL1O43396 289 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 APOA2P02652 100 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 FBP1P09467 338 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 G6PCP35575 357 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 CEACAM3P40198 252 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 IL15RAQ13261 267 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 RTL8BQ17RB0 113 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 TPTE2P1Q5T6R2 138 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 EIF5AL1Q6IS14 154 aaKnown RBP9.08□□□□□ -0.96
USP3-218ENST00000560202 PPP1R1CQ8WVI7 109 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 GPR146Q96CH1 333 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 MMP24Q9Y5R2 645 aa9.08□□□□□ -0.96
USP3-218ENST00000560202 MAP1AP78559 2803 aaPredicted RBP9.08□□□□□ -0.96
USP3-218ENST00000560202 IGHV1-3A0A0C4DH29 117 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 A0A1B0GU03 582 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 EPHA1P21709 976 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 GATA3P23771 443 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 LGALS4P56470 323 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 PJVKQ0ZLH3 352 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 LRRC37A5PQ49AS3 106 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 MINOS1Q5TGZ0 78 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 LHFPL4Q7Z7J7 247 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 FAM219AQ8IW50 185 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 WFDC11Q8NEX6 87 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 OR1S2Q8NGQ3 325 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 NANPQ8TBE9 248 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 RXFP4Q8TDU9 374 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 R3HDM4Q96D70 268 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 RBMXL1Q96E39 390 aaKnown RBP9.07□□□□□ -0.96
USP3-218ENST00000560202 C7orf69Q9H7B7 122 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 MINOS1-NBL1R4GNA1 71 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 PDZD2O15018 2839 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 HECTD1Q9ULT8 2610 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 CENPVL3A0A0U1RRI6 287 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 MARCH11A6NNE9 402 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 MT-ND4LP03901 98 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 IGKV1-16P04430 117 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 P0C879 139 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 IGHV4-31P0DP07 118 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 SLC25A6P12236 298 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 NQO2P16083 231 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 PSMB6P28072 239 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 MC5RP33032 325 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 IZUMO4Q1ZYL8 232 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 TMEM249Q2WGJ8 235 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 DNLZQ5SXM8 178 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 TMEM88Q6PEY1 159 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 Q6ZRM9 215 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 MOB3BQ86TA1 216 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 PDPNQ86YL7 162 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 UQCC1Q9NVA1 299 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 WASHC3Q9Y3C0 194 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 TBL2Q9Y4P3 447 aaKnown RBP9.07□□□□□ -0.96
USP3-218ENST00000560202 HILPDAQ9Y5L2 63 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 DMRT1Q9Y5R6 373 aa9.07□□□□□ -0.96
USP3-218ENST00000560202 A0A1W2PPI3 338 aa9.06□□□□□ -0.96
USP3-218ENST00000560202 TGFAP01135 160 aa9.06□□□□□ -0.96
USP3-218ENST00000560202 CD81P60033 236 aa9.06□□□□□ -0.96
USP3-218ENST00000560202 ERVK-16P61578 105 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms