RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 hCG_1809904A0A1W2PP81 198 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 A0A1W2PPE2 198 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 A0A1W2PR64 198 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 A0A1W2PRD5 423 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 A0A1W2PRF3 423 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 A0A1W2PRM7 423 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 A0A1W2PRV1 198 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 RBFOX2O43251 390 aaKnown RBP eCLIP11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 SLC25A16P16260 332 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 ADCYAP1P18509 176 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 PAX6P26367 422 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 MIDNQ504T8 468 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 CXorf66Q5JRM2 361 aaPredicted RBP11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 CBLN2Q8IUK8 224 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 VKORC1L1Q8N0U8 176 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 OR5AN1Q8NGI8 311 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 ABCA1O95477 2261 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 CREBBPQ92793 2442 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 H0YJW9 148 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 USF1P22415 310 aaPredicted RBP11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 CYCSP99999 105 aaKnown RBP11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 PAX8Q06710 450 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 Q5PR19 223 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 FAM71F2Q6NXP2 309 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 LHFPL4Q7Z7J7 247 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 MAPK1IP1LQ8NDC0 245 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 RRNAD1Q96FB5 475 aaKnown RBP11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 PCGF1Q9BSM1 259 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 PLEKHA2Q9HB19 425 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 CACNG5Q9UF02 275 aa11.56□□□□□ -0.56
RABGGTA-209ENST00000559551 SRRM4A7MD48 611 aaKnown RBP11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 K7EPK0 472 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 NXPH3O95157 252 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 HPRT1P00492 218 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 LYL1P12980 280 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 AKR1C2P52895 323 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 PRRX1P54821 245 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 FOXRED2Q8IWF2 684 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 FAM71E2Q8N5Q1 922 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 OR13D1Q8NGV5 346 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 SFT2D1Q8WV19 159 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 R3HDM4Q96D70 268 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 C1orf159Q96HA4 380 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 AJUBAQ96IF1 538 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 ADTRPQ96IZ2 230 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 C11orf1Q9H5F2 150 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 RCL1Q9Y2P8 373 aaKnown RBP11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 MMP24Q9Y5R2 645 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 MARCH11A6NNE9 402 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 TOX4O94842 621 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 SCGB1D2O95969 90 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 ARG1P05089 322 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 OR9G9P0C7N8 305 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 BAP18Q8IXM2 172 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 DYNAPQ8N1N2 210 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 CD300LFQ8TDQ1 290 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 RITA1Q96K30 269 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 TREM1Q9NP99 234 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 SLC35D1Q9NTN3 355 aa11.55□□□□□ -0.56
RABGGTA-209ENST00000559551 TRAV3A0A0B4J244 114 aa11.54□□□□□ -0.56
RABGGTA-209ENST00000559551 SMIM6P0DI80 62 aa11.54□□□□□ -0.56
RABGGTA-209ENST00000559551 SPP1P10451 314 aa11.54□□□□□ -0.56
RABGGTA-209ENST00000559551 FOLR2P14207 255 aa11.54□□□□□ -0.56
RABGGTA-209ENST00000559551 S100A10P60903 97 aa11.54□□□□□ -0.56
RABGGTA-209ENST00000559551 ID3Q02535 119 aa11.54□□□□□ -0.56
RABGGTA-209ENST00000559551 PRSS54Q6PEW0 395 aa11.54□□□□□ -0.56
RABGGTA-209ENST00000559551 SSX9Q7RTT3 188 aa11.54□□□□□ -0.56
RABGGTA-209ENST00000559551 TGIF2LXQ8IUE1 241 aa11.54□□□□□ -0.56
RABGGTA-209ENST00000559551 LSM5Q9Y4Y9 91 aaKnown RBP11.54□□□□□ -0.56
RABGGTA-209ENST00000559551 IGHV3-72A0A0B4J1Y9 119 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 A0A1B0GU03 582 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 A0A1W2PPI3 338 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 MSGN1A6NI15 193 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 S100A8P05109 93 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 SLC25A6P12236 298 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 KIR2DS2P43631 304 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 RAB5BP61020 215 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 PJVKQ0ZLH3 352 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 SMCO1Q147U7 214 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 FBLN7Q53RD9 439 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 OR4S2Q8NH73 311 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 UQCC1Q9NVA1 299 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 NSG2Q9Y328 171 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 IGHV1-3A0A0C4DH29 117 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 DEDDO75618 318 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 TMEM50AO95807 157 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 CRYBA1P05813 215 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 MSMBP08118 114 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 POLR2GP62487 172 aaKnown RBP eCLIP11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 AKR1C1Q04828 323 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 TPTE2P1Q5T6R2 138 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 DCUN1D4Q92564 292 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 LHX4Q969G2 390 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 SAT2Q96F10 170 aaPredicted RBP11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 MAGT1Q9H0U3 335 aa11.53□□□□□ -0.56
RABGGTA-209ENST00000559551 IL6RP08887 468 aaPredicted RBP11.52□□□□□ -0.57
RABGGTA-209ENST00000559551 NPBWR1P48145 328 aa11.52□□□□□ -0.57
RABGGTA-209ENST00000559551 RNASE11Q8TAA1 199 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-209ENST00000559551 RXFP4Q8TDU9 374 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms