RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TAS2R31P59538 309 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 GNB1P62873 340 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 PLGLAQ15195 96 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 C18orf65Q6ZTR6 163 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 TMED4Q7Z7H5 227 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 TEX45Q8NA69 505 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 TMEM167AQ8TBQ9 72 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 ZFAND1Q8TCF1 268 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 DEDD2Q8WXF8 326 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 BORCS5Q969J3 196 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 CITED1Q99966 193 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 ZNF747Q9BV97 191 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 COMMD9Q9P000 198 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 NSG2Q9Y328 171 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 MARCH11A6NNE9 402 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 TEX22C9J3V5 150 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 UPK2O00526 184 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 RBMXL2O75526 392 aaKnown RBP8.53□□□□□ -1.04
TPM1-217ENST00000559108 OR2A4O95047 310 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 OPN1MWP04001 364 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 OPN1MW2P0DN77 364 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 OPN1MW3P0DN78 364 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 AKR1C4P17516 323 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 ANXA7P20073 488 aaKnown RBP8.53□□□□□ -1.04
TPM1-217ENST00000559108 SLC6A1P30531 599 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 INPP1P49441 399 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 CRIP2P52943 208 aaPredicted RBP8.53□□□□□ -1.04
TPM1-217ENST00000559108 DHODHQ02127 395 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 ASAH1Q13510 395 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 PPP1R1AQ13522 171 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 TMEM187Q14656 261 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 FXYD3Q14802 87 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 ECSCRQ19T08 205 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 ANKRD55Q3KP44 614 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 VMA21Q3ZAQ7 101 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 ZNF562Q6V9R5 426 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 C12orf54Q6X4T0 127 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 Q6ZRM9 215 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 SPATA3Q8NHX4 192 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 GRPEL2Q8TAA5 225 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 ARPC1AQ92747 370 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 OR2A7Q96R45 310 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 TMEM222Q9H0R3 208 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 KLK15Q9H2R5 256 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 BET1LQ9NYM9 111 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 COPZ2Q9P299 210 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 C14orf166Q9Y224 244 aaKnown RBP8.53□□□□□ -1.04
TPM1-217ENST00000559108 NUBP2Q9Y5Y2 271 aa8.53□□□□□ -1.04
TPM1-217ENST00000559108 TEX13DA0A0J9YY54 714 aaPredicted RBP8.52□□□□□ -1.05
TPM1-217ENST00000559108 A0A1B0GUS0 222 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 NAP1L6A6NFF2 107 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 HMX3A6NHT5 357 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 AP4M1O00189 453 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 CDS2O95674 445 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 NQO2P16083 231 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 SPNP16150 400 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 ECI1P42126 302 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 OR2B8PP59922 312 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 DEFA5Q01523 94 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 CBX3Q13185 183 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 RBMS2Q15434 407 aaKnown RBP8.52□□□□□ -1.05
TPM1-217ENST00000559108 TNXAQ16473 311 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 ARSJQ5FYB0 599 aaPredicted RBP8.52□□□□□ -1.05
TPM1-217ENST00000559108 C11orf87Q6NUJ2 197 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 SELENOHQ8IZQ5 122 aaKnown RBP8.52□□□□□ -1.05
TPM1-217ENST00000559108 CCDC71LQ8N9Z2 235 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 LFNGQ8NES3 379 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 OR5AU1Q8NGC0 362 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 SRSF12Q8WXF0 261 aaKnown RBP8.52□□□□□ -1.05
TPM1-217ENST00000559108 GALNT14Q96FL9 552 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 CITED2Q99967 270 aaPredicted RBP8.52□□□□□ -1.05
TPM1-217ENST00000559108 SLC25A21Q9BQT8 299 aaPredicted RBP8.52□□□□□ -1.05
TPM1-217ENST00000559108 C7orf50Q9BRJ6 194 aaKnown RBP8.52□□□□□ -1.05
TPM1-217ENST00000559108 FAM212BQ9NTI7 297 aaPredicted RBP8.52□□□□□ -1.05
TPM1-217ENST00000559108 ZNF580Q9UK33 172 aa8.52□□□□□ -1.05
TPM1-217ENST00000559108 TRAV41A0A0B4J266 112 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 A0A0B4J293 547 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 PSMB11A5LHX3 300 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 MSGN1A6NI15 193 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 KCNAB3O43448 404 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 HRASP01112 189 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 IGLV1-40P01703 118 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 KIAA0141Q14154 515 aaPredicted RBP8.51□□□□□ -1.05
TPM1-217ENST00000559108 SLC25A42Q86VD7 318 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 FOXRED2Q8IWF2 684 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 TCTEX1D1Q8N7M0 179 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 C3orf56Q8N813 242 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 POC5Q8NA72 575 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 MINDY2Q8NBR6 621 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 OR52B4Q8NGK2 314 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 SGMS2Q8NHU3 365 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 CD300LFQ8TDQ1 290 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 TMEM56Q96MV1 263 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 C20orf85Q9H1P6 137 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 TMEM56-RWDD3S4R434 201 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 VWFP04275 2813 aa8.51□□□□□ -1.05
TPM1-217ENST00000559108 TRAV6A0A075B6T7 132 aa8.5□□□□□ -1.05
TPM1-217ENST00000559108 TEX50A0A1B0GTY4 177 aa8.5□□□□□ -1.05
TPM1-217ENST00000559108 IGLC7A0M8Q6 106 aa8.5□□□□□ -1.05
TPM1-217ENST00000559108 TSPAN15O95858 294 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms