RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 ZNF107Q9UII5 783 aaPredicted RBP7.6□□□□□ -1.19
SPG11-214ENST00000558989 WSB1Q9Y6I7 421 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 A3GALT2U3KPV4 340 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 TRBV6-7A0A0A0MS04 114 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 TRAV25A0A0B4J276 109 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 H0YJW9 148 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 NBR2O15453 112 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 PROP1O75360 226 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 LY6G6FQ5SQ64 297 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 FAM71E2Q8N5Q1 922 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 SAMD12Q8N8I0 201 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 CHPT1Q8WUD6 406 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 FAM110AQ9BQ89 295 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 COMMD3Q9UBI1 195 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 TNCP24821 2201 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 G3V4G9 280 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 PRB2P02812 416 aaPredicted RBP7.59□□□□□ -1.19
SPG11-214ENST00000558989 TFAP2AP05549 437 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 RRASP10301 218 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 SLC35B1P78383 322 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 KIR3DS1Q14943 382 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 ARL6IP1Q15041 203 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 GPR107Q5VW38 600 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 ZNF383Q8NA42 475 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 OR4F17Q8NGA8 305 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 OR13F1Q8NGS4 319 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 DUX3Q96PT4 197 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 OR4F4Q96R69 305 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 CABLES2Q9BTV7 478 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 DIABLOQ9NR28 239 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 SDHAF2Q9NX18 166 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 SPATA2Q9UM82 520 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 WASHC3Q9Y3C0 194 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 TSSC4Q9Y5U2 329 aaPredicted RBP7.59□□□□□ -1.19
SPG11-214ENST00000558989 ETV7Q9Y603 341 aa7.59□□□□□ -1.19
SPG11-214ENST00000558989 PCP4L1A6NKN8 68 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 B5MCH6 92 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 G3V318 75 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 AP4M1O00189 453 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 ATP6V0E1O15342 81 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 IGKV1-16P04430 117 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 ARPC4P59998 168 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 TSPAN5P62079 268 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 ECSCRQ19T08 205 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 OR2B11Q5JQS5 317 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 CASTOR1Q8WTX7 329 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 TMEM170AQ8WVE7 144 aa7.58□□□□□ -1.2
SPG11-214ENST00000558989 FAM103A1Q9BTL3 118 aaKnown RBP7.58□□□□□ -1.2
SPG11-214ENST00000558989 GEMIN7Q9H840 131 aaKnown RBP7.58□□□□□ -1.2
SPG11-214ENST00000558989 OR5H14A6NHG9 310 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 FCN1O00602 326 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 ITGB1BP1O14713 200 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 SCGNO76038 276 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 APOA2P02652 100 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 VDAC1P21796 283 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 DTYMKP23919 212 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 PITPNAQ00169 270 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 PNLIPRP3Q17RR3 467 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 C5orf64Q2M2E5 130 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 UBE2NLQ5JXB2 153 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 FAM71F2Q6NXP2 309 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 FAM159AQ6UWV7 190 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 ETV3LQ6ZN32 361 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 ERASQ7Z444 233 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 LAX1Q8IWV1 398 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 H1FOOQ8IZA3 346 aaPredicted RBP7.57□□□□□ -1.2
SPG11-214ENST00000558989 KLHL30-AS1Q8NEE0 82 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 BEST4Q8NFU0 473 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 S100A16Q96FQ6 103 aaKnown RBP7.57□□□□□ -1.2
SPG11-214ENST00000558989 GPHA2Q96T91 129 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 TPSG1Q9NRR2 321 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 METTL1Q9UBP6 276 aaKnown RBP7.57□□□□□ -1.2
SPG11-214ENST00000558989 IGHV7-81A0A0B4J1V7 117 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 A0A1W2PPQ1 181 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 RRHO14718 337 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 EIF4EP06730 217 aaKnown RBP7.57□□□□□ -1.2
SPG11-214ENST00000558989 GCSHP23434 173 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 SMCPP49901 116 aaPredicted RBP7.57□□□□□ -1.2
SPG11-214ENST00000558989 PPT1P50897 306 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 RAB25P57735 213 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 GNB1P62873 340 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 TATDN3Q17R31 274 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 RGS21Q2M5E4 152 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 DEFB136Q30KP8 78 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 RNASE12Q5GAN4 147 aaKnown RBP7.57□□□□□ -1.2
SPG11-214ENST00000558989 TMEM69Q5SWH9 247 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 NRARPQ7Z6K4 114 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 GPX8Q8TED1 209 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 SLC25A46Q96AG3 418 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 OR5B12Q96R08 314 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 MRPS26Q9BYN8 205 aaKnown RBP7.57□□□□□ -1.2
SPG11-214ENST00000558989 OR51J1Q9H342 316 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 ANXA10Q9UJ72 324 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 FBXO7Q9Y3I1 522 aa7.57□□□□□ -1.2
SPG11-214ENST00000558989 IGKV1D-13A0A0B4J2D9 117 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 HPGDSO60760 199 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 IGKV1-13P0DP09 117 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 RAB9AP51151 201 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 TAS2R20P59543 309 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 FXYD4P59646 89 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms