RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 TMEM140Q9NV12 185 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 BET1LQ9NYM9 111 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 TMEM56-RWDD3S4R434 201 aa9.69□□□□□ -0.86
SHMT2-209ENST00000553949 IGHV7-81A0A0B4J1V7 117 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 C9orf170A2RU37 121 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 LINC01548A6NM66 108 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 CREBL2O60519 120 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-209ENST00000553949 ATG12O94817 140 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 IGKV1-5P01602 117 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 IGHG2P01859 326 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 HLA-AP01891 365 aaKnown RBP9.68□□□□□ -0.86
SHMT2-209ENST00000553949 IL6RP08887 468 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-209ENST00000553949 SPNP16150 400 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 CX3CL1P78423 397 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 SRPXP78539 464 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 TMEM95Q3KNT9 176 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 TMEM268Q5VZI3 342 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 SLC35E3Q7Z769 313 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 LYG2Q86SG7 212 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 MMD2Q8IY49 270 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 CADM3Q8N126 398 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 LGI3Q8N145 548 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 OR2T6Q8NHC8 308 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 TMEM167AQ8TBQ9 72 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 CASTOR1Q8WTX7 329 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 RBPMSQ93062 196 aaKnown RBP9.68□□□□□ -0.86
SHMT2-209ENST00000553949 IL22RA2Q969J5 263 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 C19orf24Q9BVV8 132 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 ZNF430Q9H8G1 570 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-209ENST00000553949 C2CD3Q4AC94 2353 aa9.68□□□□□ -0.86
SHMT2-209ENST00000553949 TRAV3A0A0B4J244 114 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 INMT-MINDY4F8WBC2 141 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 UPK2O00526 184 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 KCNAB3O43448 404 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 MDKP21741 143 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-209ENST00000553949 VDAC2P45880 294 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-209ENST00000553949 AKR1C2P52895 323 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 GNB1P62873 340 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 SSBP2P81877 361 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-209ENST00000553949 RGS21Q2M5E4 152 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 ANKRD55Q3KP44 614 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 ARSJQ5FYB0 599 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-209ENST00000553949 ZNF562Q6V9R5 426 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 H2BFWTQ7Z2G1 175 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 SLC35G3Q8N808 338 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 OR52B4Q8NGK2 314 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 LINC01006Q8NI28 216 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 TMEM158Q8WZ71 300 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 MARVELD1Q9BSK0 173 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 OR51J1Q9H342 316 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 SERTAD4Q9NUC0 356 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 MMP24Q9Y5R2 645 aa9.67□□□□□ -0.86
SHMT2-209ENST00000553949 A0A0B4J2A0 478 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 PIGBOS1A0A0B4J2F0 54 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 TMEM89A2RUT3 159 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 CLPSL1A2RUU4 121 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 ACTL6BO94805 426 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 CNIH1O95406 144 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 DUS4LO95620 317 aaKnown RBP9.66□□□□□ -0.86
SHMT2-209ENST00000553949 OR9G9P0C7N8 305 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 P0C879 139 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 HLA-GP17693 338 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 RPL8P62917 257 aaKnown RBP9.66□□□□□ -0.86
SHMT2-209ENST00000553949 NDPQ00604 133 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 FOXL1Q12952 345 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 FXYD3Q14802 87 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 TNXAQ16473 311 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 LYZL2Q7Z4W2 148 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 FOXRED2Q8IWF2 684 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 LRTM2Q8N967 370 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 COQ8AQ8NI60 647 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 RNASE11Q8TAA1 199 aaKnown RBP9.66□□□□□ -0.86
SHMT2-209ENST00000553949 ARPC1AQ92747 370 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 RRNAD1Q96FB5 475 aaKnown RBP9.66□□□□□ -0.86
SHMT2-209ENST00000553949 SEC22CQ9BRL7 303 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 PARP11Q9NR21 331 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 SHPKQ9UHJ6 478 aa9.66□□□□□ -0.86
SHMT2-209ENST00000553949 ATRQ13535 2644 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 FBN1P35555 2871 aaKnown RBP9.65□□□□□ -0.86
SHMT2-209ENST00000553949 A0A0G2JRQ6 117 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 AP4M1O00189 453 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 ATP6V0E1O15342 81 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 SNAPC5O75971 98 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 IGF1P05019 195 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 IL5P05113 134 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 FGF2P09038 288 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 VDAC1P21796 283 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 MAS1LP35410 378 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 COMPP49747 757 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-209ENST00000553949 IZUMO4Q1ZYL8 232 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 FAM219AQ8IW50 185 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 OR4A16Q8NH70 328 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 GRPEL2Q8TAA5 225 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 ZNF431Q8TF32 576 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-209ENST00000553949 ABHD5Q8WTS1 349 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 MITD1Q8WV92 249 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 LSM10Q969L4 123 aaKnown RBP9.65□□□□□ -0.86
SHMT2-209ENST00000553949 NOL4LQ96MY1 436 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-209ENST00000553949 LINC00527Q9UJ94 153 aa9.65□□□□□ -0.86
SHMT2-209ENST00000553949 PRNDQ9UKY0 176 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms