RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 GIMAP1Q8WWP7 306 aa9.93□□□□□ -0.82
NPAS3-209ENST00000551008 FANCD2OSQ96PS1 177 aa9.93□□□□□ -0.82
NPAS3-209ENST00000551008 OR2A7Q96R45 310 aa9.93□□□□□ -0.82
NPAS3-209ENST00000551008 PHB2Q99623 299 aa9.93□□□□□ -0.82
NPAS3-209ENST00000551008 DCUN1D5Q9BTE7 237 aa9.93□□□□□ -0.82
NPAS3-209ENST00000551008 SLC5A7Q9GZV3 580 aa9.93□□□□□ -0.82
NPAS3-209ENST00000551008 NAA50Q9GZZ1 169 aaKnown RBP9.93□□□□□ -0.82
NPAS3-209ENST00000551008 FXYD6Q9H0Q3 95 aa9.93□□□□□ -0.82
NPAS3-209ENST00000551008 PEF1Q9UBV8 284 aaKnown RBP9.93□□□□□ -0.82
NPAS3-209ENST00000551008 SULT1C2O00338 296 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 AREGP15514 252 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 ZP3P21754 424 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 GNRHRP30968 328 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 VBP1P61758 197 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 EXOSC2Q13868 293 aaKnown RBP9.92□□□□□ -0.82
NPAS3-209ENST00000551008 POU2AF1Q16633 256 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 KLK9Q2XQG4 91 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 SSX9Q7RTT3 188 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 CROCCP3Q8IVE0 287 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 SBSPONQ8IVN8 264 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 OR9G4Q8NGQ1 327 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 OR6Q1Q8NGQ2 317 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 USMG5Q96IX5 58 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 SPIN2AQ99865 258 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 SPIN2BQ9BPZ2 258 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 THAP7Q9BT49 309 aaPredicted RBP9.92□□□□□ -0.82
NPAS3-209ENST00000551008 KLK9Q9UKQ9 250 aa9.92□□□□□ -0.82
NPAS3-209ENST00000551008 NPIPB5A8MRT5 1133 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 RBFOX2O43251 390 aaKnown RBP eCLIP9.91□□□□□ -0.82
NPAS3-209ENST00000551008 OR2J3O76001 311 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 CSN3P07498 182 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 EDN2P20800 178 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 CBX5P45973 191 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 RPL27AP46776 148 aaKnown RBP9.91□□□□□ -0.82
NPAS3-209ENST00000551008 RFX2P48378 723 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 MECP2P51608 486 aaKnown RBP9.91□□□□□ -0.82
NPAS3-209ENST00000551008 TMEM69Q5SWH9 247 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 OR4A47Q6IF82 309 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 DHRS11Q6UWP2 260 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 TMEM17Q86X19 198 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 LYSMD2Q8IV50 215 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 SPAG16Q8N0X2 631 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 ZBTB34Q8NCN2 500 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 GPX8Q8TED1 209 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 S100A16Q96FQ6 103 aaKnown RBP9.91□□□□□ -0.82
NPAS3-209ENST00000551008 BET1LQ9NYM9 111 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 EHFQ9NZC4 300 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 SMAD5-AS1Q9Y6J3 95 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 U3KQK5 164 aa9.91□□□□□ -0.82
NPAS3-209ENST00000551008 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.9□□□□□ -0.82
NPAS3-209ENST00000551008 IZUMO1RA6ND01 250 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 FAM223BA6NKX1 122 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 CREBL2O60519 120 aaPredicted RBP9.9□□□□□ -0.82
NPAS3-209ENST00000551008 S1PR2O95136 353 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 PMP2P02689 132 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 CRYGCP07315 174 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 NHLRC4P0CG21 123 aaPredicted RBP9.9□□□□□ -0.82
NPAS3-209ENST00000551008 CTRB1P17538 263 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 KIR2DS2P43631 304 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 CTF1Q16619 201 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 CTRB2Q6GPI1 263 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 FAM223AQ8IWN6 122 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 OR51H1Q8NH63 302 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 MOB3AQ96BX8 217 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 CCDC140Q96MF4 163 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 WWC2-AS2Q96NR7 200 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 OR4C12Q96R67 309 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 VCX3AQ9NNX9 186 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 SLC2A9Q9NRM0 540 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 ZNF257Q9Y2Q1 563 aa9.9□□□□□ -0.82
NPAS3-209ENST00000551008 IGLC7A0M8Q6 106 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 PPP5D1E7EU14 171 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 MPPED1O15442 326 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 ACTL6BO94805 426 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 GABARAPO95166 117 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 NDUFB8O95169 186 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 FRMD6-AS1P0C7T7 363 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 HLA-GP17693 338 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 ELK1P19419 428 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 MAS1LP35410 378 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 OR2B8PP59922 312 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 RPL8P62917 257 aaKnown RBP9.89□□□□□ -0.83
NPAS3-209ENST00000551008 C15orf32Q32M92 178 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 ZNF585BQ52M93 769 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 NECAP1Q8NC96 275 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 VSTM2AQ8TAG5 236 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 FYTTD1Q96QD9 318 aaKnown RBP9.89□□□□□ -0.83
NPAS3-209ENST00000551008 RSRP1Q9BUV0 290 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 IFT46Q9NQC8 304 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 SIGLEC8Q9NYZ4 499 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 COMMD3Q9UBI1 195 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 S4R3C0 116 aa9.89□□□□□ -0.83
NPAS3-209ENST00000551008 DYNC2H1Q8NCM8 4307 aaKnown RBP9.88□□□□□ -0.83
NPAS3-209ENST00000551008 IGLV11-55A0A075B6I3 123 aa9.88□□□□□ -0.83
NPAS3-209ENST00000551008 UPK2O00526 184 aa9.88□□□□□ -0.83
NPAS3-209ENST00000551008 HPGDSO60760 199 aa9.88□□□□□ -0.83
NPAS3-209ENST00000551008 HRASP01112 189 aa9.88□□□□□ -0.83
NPAS3-209ENST00000551008 HLA-AP01891 365 aaKnown RBP9.88□□□□□ -0.83
NPAS3-209ENST00000551008 APOA1P02647 267 aa9.88□□□□□ -0.83
NPAS3-209ENST00000551008 REG1AP05451 166 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms