RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 TFPI2P48307 235 aa19.22■□□□□ 0.67
NPAS3-206ENST00000548645 TBC1D28Q2M2D7 210 aa19.22■□□□□ 0.67
NPAS3-206ENST00000548645 C1orf174Q8IYL3 243 aa19.22■□□□□ 0.67
NPAS3-206ENST00000548645 SLC35E1Q96K37 410 aa19.22■□□□□ 0.67
NPAS3-206ENST00000548645 SLC45A2Q9UMX9 530 aa19.22■□□□□ 0.67
NPAS3-206ENST00000548645 J3QW42 95 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 MT-ND6P03923 174 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 GABRA2P47869 451 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 ZNF766Q5HY98 468 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 C11orf42Q8N5U0 333 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 MSL2Q9HCI7 577 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 FAM90A9PA6NNJ1 464 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 CHRNB4P30926 498 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 OR4A16Q8NH70 328 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 SFXN3Q9BWM7 321 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 PSG11Q9UQ72 335 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 TBL2Q9Y4P3 447 aaKnown RBP19.21■□□□□ 0.67
NPAS3-206ENST00000548645 VPS13AQ96RL7 3174 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 PRAMEF5Q5TYX0 476 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 PRAMEF6Q5VXH4 476 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 WDR73Q6P4I2 378 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 Q8N976 141 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 HES4Q9HCC6 221 aa19.21■□□□□ 0.67
NPAS3-206ENST00000548645 NTN3O00634 580 aaPredicted RBP19.2■□□□□ 0.66
NPAS3-206ENST00000548645 MMP23AO75900 390 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 CTRLP40313 264 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 PCP4P48539 62 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 RHOBP62745 196 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 GABRA6Q16445 453 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 SPATA45Q537H7 98 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 OR10J3Q5JRS4 329 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 OR8I2Q8N0Y5 310 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 UQCR10Q9UDW1 63 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 NAT8BQ9UHF3 227 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 V9GYV3 84 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 FRMD6-AS1P0C7T7 363 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 BCL2L2Q92843 193 aaPredicted RBP19.2■□□□□ 0.66
NPAS3-206ENST00000548645 COQ2Q96H96 371 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 NRN1Q9NPD7 142 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 RNF114Q9Y508 228 aa19.2■□□□□ 0.66
NPAS3-206ENST00000548645 PRSS46E5RG02 174 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 PLGLB1Q02325 96 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 C21orf62-AS1Q17RA5 79 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 DNAJC4Q9NNZ3 241 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 SAA2-SAA4A0A096LPE2 208 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 AMTP48728 403 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 MRPL49Q13405 166 aaKnown RBP19.19■□□□□ 0.66
NPAS3-206ENST00000548645 MMDQ15546 238 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 COX19Q49B96 90 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 ST6GALNAC3Q8NDV1 305 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 OR52E5Q8NH55 327 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 SSMEM1Q8WWF3 244 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 NPVFQ9HCQ7 196 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 CACNA1DQ01668 2161 aa19.19■□□□□ 0.66
NPAS3-206ENST00000548645 IGHV3-43A0A0B4J1X8 118 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 ZNF253O75346 499 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 IGHV3-43DP0DP04 118 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 VDAC2P45880 294 aaPredicted RBP19.18■□□□□ 0.66
NPAS3-206ENST00000548645 FOXF2Q12947 444 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 KMT2EQ8IZD2 1858 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 FAM166BA8MTA8 275 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 EFNB3Q15768 340 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 STARD4Q96DR4 205 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 C12orf49Q9H741 205 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 DOCK7Q96N67 2140 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 TCF21O43680 179 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 SMPD2O60906 423 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 FCGR3BO75015 233 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 KCNS1Q96KK3 526 aa19.18■□□□□ 0.66
NPAS3-206ENST00000548645 ZNF891A8MT65 544 aaPredicted RBP19.17■□□□□ 0.66
NPAS3-206ENST00000548645 SSTR5P35346 364 aa19.17■□□□□ 0.66
NPAS3-206ENST00000548645 MAGEA5P43359 124 aa19.17■□□□□ 0.66
NPAS3-206ENST00000548645 SSPNQ14714 243 aa19.17■□□□□ 0.66
NPAS3-206ENST00000548645 ALKBH6Q3KRA9 238 aa19.17■□□□□ 0.66
NPAS3-206ENST00000548645 SEPSECSQ9HD40 501 aaKnown RBP19.17■□□□□ 0.66
NPAS3-206ENST00000548645 LOXL2Q9Y4K0 774 aa19.17■□□□□ 0.66
NPAS3-206ENST00000548645 LSM4Q9Y4Z0 139 aaKnown RBP19.17■□□□□ 0.66
NPAS3-206ENST00000548645 WDFY3Q8IZQ1 3526 aa19.17■□□□□ 0.66
NPAS3-206ENST00000548645 DEFB108AA8MXU0 73 aa19.17■□□□□ 0.66
NPAS3-206ENST00000548645 GFRA3O60609 400 aa19.17■□□□□ 0.66
NPAS3-206ENST00000548645 AREGP15514 252 aa19.17■□□□□ 0.66
NPAS3-206ENST00000548645 CX3CL1P78423 397 aa19.17■□□□□ 0.66
NPAS3-206ENST00000548645 WNT9BO14905 357 aa19.16■□□□□ 0.66
NPAS3-206ENST00000548645 DUTP33316 252 aaKnown RBP19.16■□□□□ 0.66
NPAS3-206ENST00000548645 VASH2Q86V25 355 aa19.16■□□□□ 0.66
NPAS3-206ENST00000548645 RFESDQ8TAC1 157 aa19.16■□□□□ 0.66
NPAS3-206ENST00000548645 TXN2Q99757 166 aa19.16■□□□□ 0.66
NPAS3-206ENST00000548645 OR10J4P0C629 311 aa19.16■□□□□ 0.66
NPAS3-206ENST00000548645 GNG4P50150 75 aa19.16■□□□□ 0.66
NPAS3-206ENST00000548645 SPATA31B1PQ5VZV4 182 aa19.16■□□□□ 0.66
NPAS3-206ENST00000548645 FBXW9Q5XUX1 488 aa19.16■□□□□ 0.66
NPAS3-206ENST00000548645 OR5G3P0C626 314 aa19.15■□□□□ 0.66
NPAS3-206ENST00000548645 GPR12P47775 334 aa19.15■□□□□ 0.66
NPAS3-206ENST00000548645 ERVK-16P61578 105 aa19.15■□□□□ 0.66
NPAS3-206ENST00000548645 ABHD12Q8N2K0 398 aa19.15■□□□□ 0.66
NPAS3-206ENST00000548645 IQCF6A8MYZ5 107 aa19.15■□□□□ 0.66
NPAS3-206ENST00000548645 IGLC2P0DOY2 106 aa19.15■□□□□ 0.66
NPAS3-206ENST00000548645 IGLC3P0DOY3 106 aa19.15■□□□□ 0.66
NPAS3-206ENST00000548645 STPG3Q8N7X2 389 aa19.15■□□□□ 0.66
NPAS3-206ENST00000548645 OR13A1Q8NGR1 328 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms