RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ADARB2-AS1A8MUL3 147 aa11.34□□□□□ -0.59
DDX54-203ENST00000546869 KBTBD11O94819 623 aa11.34□□□□□ -0.59
DDX54-203ENST00000546869 BRI3O95415 125 aa11.34□□□□□ -0.59
DDX54-203ENST00000546869 RPA2P15927 270 aa11.34□□□□□ -0.59
DDX54-203ENST00000546869 PSMB8P28062 276 aa11.34□□□□□ -0.59
DDX54-203ENST00000546869 LPAR6P43657 344 aa11.34□□□□□ -0.59
DDX54-203ENST00000546869 PIGPP57054 158 aa11.34□□□□□ -0.59
DDX54-203ENST00000546869 BAK1Q16611 211 aa11.34□□□□□ -0.59
DDX54-203ENST00000546869 C11orf44Q8N8P7 122 aa11.34□□□□□ -0.59
DDX54-203ENST00000546869 CCDC71LQ8N9Z2 235 aa11.34□□□□□ -0.59
DDX54-203ENST00000546869 RTBDNQ9BSG5 229 aaPredicted RBP11.34□□□□□ -0.59
DDX54-203ENST00000546869 ZNF430Q9H8G1 570 aaPredicted RBP11.34□□□□□ -0.59
DDX54-203ENST00000546869 G3V318 75 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 S1PR2O95136 353 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 CNIH1O95406 144 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 PPP5CP53041 499 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 CXorf66Q5JRM2 361 aaPredicted RBP11.33□□□□□ -0.6
DDX54-203ENST00000546869 OR4A47Q6IF82 309 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 VKORC1L1Q8N0U8 176 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 OR5M8Q8NGP6 311 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 MYOZ3Q8TDC0 251 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 C5orf66Q9H5L9 145 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 AKIP1Q9NQ31 210 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 COPZ2Q9P299 210 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 C14orf166Q9Y224 244 aaKnown RBP11.33□□□□□ -0.6
DDX54-203ENST00000546869 WSB1Q9Y6I7 421 aa11.33□□□□□ -0.6
DDX54-203ENST00000546869 C3orf85A0A1B0GTC6 90 aa11.32□□□□□ -0.6
DDX54-203ENST00000546869 NAP1L6A6NFF2 107 aa11.32□□□□□ -0.6
DDX54-203ENST00000546869 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
DDX54-203ENST00000546869 H0Y980 276 aa11.32□□□□□ -0.6
DDX54-203ENST00000546869 UPK2O00526 184 aa11.32□□□□□ -0.6
DDX54-203ENST00000546869 ACTL6BO94805 426 aa11.32□□□□□ -0.6
DDX54-203ENST00000546869 CDX1P47902 265 aaPredicted RBP11.32□□□□□ -0.6
DDX54-203ENST00000546869 RPL23AP62750 156 aaKnown RBP11.32□□□□□ -0.6
DDX54-203ENST00000546869 LFNGQ8NES3 379 aa11.32□□□□□ -0.6
DDX54-203ENST00000546869 SRSF12Q8WXF0 261 aaKnown RBP11.32□□□□□ -0.6
DDX54-203ENST00000546869 S100ZQ8WXG8 99 aa11.32□□□□□ -0.6
DDX54-203ENST00000546869 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
DDX54-203ENST00000546869 SLC25A21Q9BQT8 299 aaPredicted RBP11.32□□□□□ -0.6
DDX54-203ENST00000546869 MCUBQ9NWR8 336 aa11.32□□□□□ -0.6
DDX54-203ENST00000546869 FOXA2Q9Y261 457 aaPredicted RBP11.32□□□□□ -0.6
DDX54-203ENST00000546869 MSGN1A6NI15 193 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 H3BUA1 57 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 PI3P19957 117 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 ERVK-16P61578 105 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 GNB1P62873 340 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 RPL8P62917 257 aaKnown RBP11.31□□□□□ -0.6
DDX54-203ENST00000546869 KIAA0141Q14154 515 aaPredicted RBP11.31□□□□□ -0.6
DDX54-203ENST00000546869 TNXAQ16473 311 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 ECSCRQ19T08 205 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 TRIQKQ629K1 86 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 UNQ5815/PRO19632Q6UWF5 114 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 DMBX1Q8NFW5 382 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 OR4F17Q8NGA8 305 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 SEC22AQ96IW7 307 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 OR4F4Q96R69 305 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 SPIN2AQ99865 258 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 SPIN2BQ9BPZ2 258 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 C7orf50Q9BRJ6 194 aaKnown RBP11.31□□□□□ -0.6
DDX54-203ENST00000546869 FAM103A1Q9BTL3 118 aaKnown RBP11.31□□□□□ -0.6
DDX54-203ENST00000546869 TMEM140Q9NV12 185 aa11.31□□□□□ -0.6
DDX54-203ENST00000546869 SOX15O60248 233 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 ATG12O94817 140 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 KRASP01116 189 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 IGKV1-39P01597 117 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 IGKV1D-39P04432 117 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 RPLP1P05386 114 aaKnown RBP11.3□□□□□ -0.6
DDX54-203ENST00000546869 SERPINE2P07093 398 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 IL7P13232 177 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 UCP1P25874 307 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 CD40LGP29965 261 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 INPP1P49441 399 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 RAB9AP51151 201 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 ASPHD1Q5U4P2 390 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 ZNF57Q68EA5 555 aaPredicted RBP11.3□□□□□ -0.6
DDX54-203ENST00000546869 TMEM65Q6PI78 240 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 SSX9Q7RTT3 188 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 GRPEL2Q8TAA5 225 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 ABHD5Q8WTS1 349 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 GALNT14Q96FL9 552 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 UBE2E2Q96LR5 201 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 TP53RKQ96S44 253 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 TSC22D3Q99576 134 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 CCDC32Q9BV29 185 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 SLA2Q9H6Q3 261 aa11.3□□□□□ -0.6
DDX54-203ENST00000546869 A0A1W2PN81 502 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 CRYM-AS1A6NIL9 109 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 CDS2O95674 445 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 HLA-GP17693 338 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 CHRNA7P36544 502 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 DHODHQ02127 395 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 NSUN5P1Q3KNT7 163 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 ZNF695Q8IW36 515 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 TTC9CQ8N5M4 171 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 ZNF491Q8N8L2 437 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 SRSF8Q9BRL6 282 aaKnown RBP11.29□□□□□ -0.6
DDX54-203ENST00000546869 TMEM222Q9H0R3 208 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 NAA60Q9H7X0 242 aa11.29□□□□□ -0.6
DDX54-203ENST00000546869 VSIG4Q9Y279 399 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms