RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TAS2R30P59541 319 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 C10orf55Q5SWW7 151 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 ZNF833PQ6ZTB9 187 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 OR10W1Q8NGF6 305 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 TPSG1Q9NRR2 321 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 UQCC1Q9NVA1 299 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 F8W036 122 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 H0YJW9 148 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 RBFOX2O43251 390 aaKnown RBP eCLIP11.47□□□□□ -0.572e-6■■□□□ 13.9
ACTN1-205ENST00000538545 APELAP0DMC3 54 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 KLRD1Q13241 179 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 LDLRAD2Q5SZI1 272 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 MARVELD3Q96A59 401 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 HARBI1Q96MB7 349 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
ACTN1-205ENST00000538545 ABCA12Q86UK0 2595 aa11.46□□□□□ -0.57
ACTN1-205ENST00000538545 PIGBOS1A0A0B4J2F0 54 aa11.46□□□□□ -0.57
ACTN1-205ENST00000538545 RAB19A4D1S5 217 aa11.46□□□□□ -0.57
ACTN1-205ENST00000538545 RNASEK-C17orf49H0YIS7 233 aa11.46□□□□□ -0.57
ACTN1-205ENST00000538545 ENSAO43768 121 aaKnown RBP11.46□□□□□ -0.57
ACTN1-205ENST00000538545 CNTFRP26992 372 aa11.46□□□□□ -0.57
ACTN1-205ENST00000538545 HOXA1P49639 335 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-205ENST00000538545 PPT1P50897 306 aa11.46□□□□□ -0.57
ACTN1-205ENST00000538545 HBG1P69891 147 aa11.46□□□□□ -0.57
ACTN1-205ENST00000538545 HBG2P69892 147 aa11.46□□□□□ -0.57
ACTN1-205ENST00000538545 PNKDQ8N490 385 aa11.46□□□□□ -0.57
ACTN1-205ENST00000538545 SCGB1C1Q8TD33 95 aa11.46□□□□□ -0.57
ACTN1-205ENST00000538545 SFT2D1Q8WV19 159 aa11.46□□□□□ -0.57
ACTN1-205ENST00000538545 WDR61Q9GZS3 305 aaKnown RBP11.46□□□□□ -0.57
ACTN1-205ENST00000538545 EIF5A2Q9GZV4 153 aaKnown RBP11.46□□□□□ -0.57
ACTN1-205ENST00000538545 IGHV2-26A0A0B4J1V2 119 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 SMCO3A2RU48 225 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 NDUFA2O43678 99 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 DFFBO76075 338 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 IGKV1D-33P01593 117 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 IGKV1-33P01594 117 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 FBP1P09467 338 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 SNCAP37840 140 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 AKIRIN2Q53H80 203 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 AKR1C8PQ5T2L2 129 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 MOB3BQ86TA1 216 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.46□□□□□ -0.58
ACTN1-205ENST00000538545 OR10P1Q8NGE3 313 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 TMEM133Q9H2Q1 129 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 GAB2Q9UQC2 676 aa11.46□□□□□ -0.58
ACTN1-205ENST00000538545 USP9YO00507 2555 aaPredicted RBP11.46□□□□□ -0.58
ACTN1-205ENST00000538545 C15orf61A6NNL5 157 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 CD24P25063 80 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 HAGHQ16775 308 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 LRRC75BQ2VPJ9 315 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 SPSB3Q6PJ21 355 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 LCN15Q6UWW0 184 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 OR8B3Q8NGG8 313 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 ST6GALNAC6Q969X2 333 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 OR8B2Q96RD0 313 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 TSNAXQ99598 290 aaKnown RBP11.45□□□□□ -0.58
ACTN1-205ENST00000538545 NABP2Q9BQ15 211 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 VDAC2P45880 294 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-205ENST00000538545 ZNF726P1Q15940 193 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 ETV3LQ6ZN32 361 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 LYPD6BQ8NI32 183 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 TAF15Q92804 592 aaKnown RBP eCLIP11.45□□□□□ -0.58
ACTN1-205ENST00000538545 SCRT1Q9BWW7 348 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 PTPN13Q12923 2485 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 ABCA2Q9BZC7 2435 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 SFTA3P0C7M3 94 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 SPCS3P61009 180 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 RAB2AP61019 212 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 GNB2P62879 340 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 MLANAQ16655 118 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 RTL8BQ17RB0 113 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 GCSAMLQ5JQS6 135 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 IL34Q6ZMJ4 242 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 OR9G1Q8NH87 305 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 OR51B2Q9Y5P1 312 aa11.45□□□□□ -0.58
ACTN1-205ENST00000538545 ZANQ9Y493 2812 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 CHD6Q8TD26 2715 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 FGF7P21781 194 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 CEBPGP53567 150 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 GUK1Q16774 197 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 ACSM6Q6P461 480 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 DTX2Q86UW9 622 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 TGIF2LXQ8IUE1 241 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 PUSL1Q8N0Z8 303 aaKnown RBP11.44□□□□□ -0.58
ACTN1-205ENST00000538545 NEIL1Q96FI4 390 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-205ENST00000538545 TMEM8BA6NDV4 472 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 IFNA4P05014 189 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 H2AFB1P0C5Y9 115 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 KIR2DS2P43631 304 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 TMEM88Q6PEY1 159 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 C19orf35Q6ZS72 473 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 Q8N7P7 452 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 NRGNQ92686 78 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 GNPNAT1Q96EK6 184 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-205ENST00000538545 TMEM14BQ9NUH8 114 aa11.44□□□□□ -0.58
ACTN1-205ENST00000538545 FAM74A7A6NL05 159 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 SLC25A17O43808 307 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 IGHV3-48P01763 117 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 ZFP36P26651 326 aaKnown RBP11.43□□□□□ -0.58
ACTN1-205ENST00000538545 AKR1C3P42330 323 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms