RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 IGKV3-15P01624 115 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 ZNF705DP0CH99 300 aaPredicted RBP2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 BLVRBP30043 206 aaPredicted RBP2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 SRP9P49458 86 aaKnown RBP2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 RWDD2BP57060 319 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 C10orf91Q5T1B1 145 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 AMTNQ6UX39 209 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 Q6ZQT7 251 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 CLVS1Q8IUQ0 354 aaPredicted RBP2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 FNDC9Q8TBE3 224 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 ZNF675Q8TD23 568 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 KLK6Q92876 244 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 TCEAL4Q96EI5 215 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 TSSK6Q9BXA6 273 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 PLA2G12AQ9BZM1 189 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 LINC00574Q9H8X3 128 aa2.78□□□□□ -1.96
AC055878.1-201ENST00000531858 ARAP1Q96P48 1450 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 FMN1Q68DA7 1419 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 TRAV9-1A0A075B6T8 112 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 TRAV38-1A0A0B4J264 116 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 GRIFINA4D1Z8 144 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 DPRXA6NFQ7 191 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 ARL5CA6NH57 179 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 A8MWP4 228 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 PANO1I0J062 215 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 OR2J2O76002 312 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 FAM107AO95990 144 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 TFPTP0C1Z6 253 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 HBA1P69905 142 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 CCL20P78556 96 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 FUT5Q11128 374 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 DHRS2Q13268 280 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 SPCS2Q15005 226 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 SURF2Q15527 256 aaPredicted RBP2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 DHFR2Q86XF0 187 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 TMEM105Q8N8V8 129 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 ST20-AS1Q8NBB2 130 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 OR11G2Q8NGC1 345 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 OR9Q1Q8NGQ5 310 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 OR4K13Q8NH42 304 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 HIST1H2BAQ96A08 127 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 HSPB9Q9BQS6 159 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 CCDC32Q9BV29 185 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 MND1Q9BWT6 205 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 C2orf16Q68DN1 1984 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 PEG3Q9GZU2 1588 aa2.77□□□□□ -1.97
AC055878.1-201ENST00000531858 ARHGEF10O15013 1369 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 A0A087WUU8 490 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 RIIAD1A6NNX1 92 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 C19orf84I3L1E1 186 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 PLA2G10O15496 165 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 IGKV1D-33P01593 117 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 IGKV1-33P01594 117 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 IGLV7-43P04211 117 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 IL4P05112 153 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 SERPINB10P48595 397 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 TSPEAR-AS2P59090 65 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 TAS2R20P59543 309 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 RPS28P62857 69 aaKnown RBP2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 LGALS9BQ3B8N2 356 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 CCDC58Q4VC31 144 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 LGALS9CQ6DKI2 356 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 RPL22L1Q6P5R6 122 aaKnown RBP2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 C16orf47Q6ZP98 133 aaPredicted RBP2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 ANGPTL5Q86XS5 388 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 EIF4E3Q8N5X7 224 aaKnown RBP2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 ZNF433Q8N7K0 673 aaPredicted RBP2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 GRPEL2Q8TAA5 225 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 KLF14Q8TD94 323 aaPredicted RBP2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 RBMXL1Q96E39 390 aaKnown RBP2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 IGF2BP2-AS1Q96M15 143 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 ERMAPQ96PL5 475 aaPredicted RBP2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 EFCAB11Q9BUY7 163 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 C11orf1Q9H5F2 150 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 ZNF230Q9UIE0 474 aaPredicted RBP2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 SNX12Q9UMY4 172 aa2.76□□□□□ -1.97
AC055878.1-201ENST00000531858 H3BMM0 161 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 ARPC5O15511 151 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 SLC25A20O43772 301 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 ZNF324O75467 553 aaPredicted RBP2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 MED6O75586 246 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 C1QAP02745 245 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 MDKP21741 143 aaPredicted RBP2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 GLRXP35754 106 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 RPL27AP46776 148 aaKnown RBP2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 ATP5G3P48201 142 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 RAB13P51153 203 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 DSCR10P59022 87 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 HIST1H4AP62805 103 aaKnown RBP2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 DEFA6Q01524 100 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 AKR1C1Q04828 323 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 LYRM7Q5U5X0 104 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 C10orf126Q8N4M7 172 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 LZICQ8WZA0 190 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 UBE2WQ96B02 151 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 RMND5BQ96G75 393 aaPredicted RBP2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 UPK3BQ9BT76 320 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 RSPO3Q9BXY4 272 aaPredicted RBP2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 EFCAB1Q9HAE3 211 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms