RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 GPHA2Q96T91 129 aa7.2□□□□□ -1.26
CTNND1-227ENST00000530748 GGACTQ9BVM4 153 aa7.2□□□□□ -1.26
CTNND1-227ENST00000530748 GLRXP35754 106 aa7.2□□□□□ -1.26
CTNND1-227ENST00000530748 ANKRD36A6QL64 1941 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 IGHV2OR16-5A0A0B4J2B6 119 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 CRYBA2P53672 197 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 BSPH1Q075Z2 132 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 ZNF56Q15929 161 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 PEAR1Q5VY43 1037 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-227ENST00000530748 GON4LQ3T8J9 2241 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 A0A0G2JMM0 328 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 A0A1W2PPB8 328 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 A0A1W2PRS3 328 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 KIR3DP1A8MWS1 328 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 H2BFSP57053 126 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 LINC00114Q6XXX2 140 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 PMCHL2Q9BQD1 86 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 IQCF6A8MYZ5 107 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 AGAP20933 346 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 OR10S1Q8NGN2 331 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 RTN4RQ9BZR6 473 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 RAXQ9Y2V3 346 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 ZIC3O60481 467 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 C1QL1O75973 258 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 CD8AP01732 235 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 IGHV3-23P01764 117 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 TRGV3P03979 118 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 COX6CP09669 75 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 CECR9P0C854 216 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 IGHV1-2P23083 117 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 ZXDCQ2QGD7 858 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-227ENST00000530748 C2orf83Q53S99 150 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 WDYHV1Q96HA8 205 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 FMC1Q96HJ9 113 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 POLR2AP24928 1970 aaKnown RBP7.19□□□□□ -1.26
CTNND1-227ENST00000530748 LEPROTL1O95214 131 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 MOSP00540 346 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 CEACAM1P13688 526 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 LCN2P80188 198 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 COL5A1-AS1Q5SY13 56 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 NPCDR1Q9BY65 106 aa7.19□□□□□ -1.26
CTNND1-227ENST00000530748 ERASQ7Z444 233 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 OSR1Q8TAX0 266 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-227ENST00000530748 IFI27L2Q9H2X8 130 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 MRPS16Q9Y3D3 137 aaKnown RBP7.18□□□□□ -1.26
CTNND1-227ENST00000530748 H0YL77 283 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 TGFBR3LH3BV60 316 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 IL4P05112 153 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 FOLR2P14207 255 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 CD69Q07108 199 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 OR4A47Q6IF82 309 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 ZNRF1Q8ND25 227 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 NPIPB3Q92617 1050 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 HIST1H2BAQ96A08 127 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 IGKV1D-33P01593 117 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 IGKV1-33P01594 117 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 MEF2CQ06413 473 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-227ENST00000530748 TCF24Q7RTU0 167 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 OR10AG1Q8NH19 301 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 NEU1Q99519 415 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 ALKBH7Q9BT30 221 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-227ENST00000530748 PARLQ9H300 379 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 RBFOX2O43251 390 aaKnown RBP eCLIP7.18□□□□□ -1.264e-7■■■■□ 19.5
CTNND1-227ENST00000530748 FAM27E3Q08E93 113 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 JOSD1Q15040 202 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-227ENST00000530748 ZNF506Q5JVG8 444 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 SAPCD1Q5SSQ6 148 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 FAM159AQ6UWV7 190 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 GOLT1AQ6ZVE7 132 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 PUSL1Q8N0Z8 303 aaKnown RBP7.18□□□□□ -1.26
CTNND1-227ENST00000530748 TEX45Q8NA69 505 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 HIST1H4GQ99525 98 aa7.18□□□□□ -1.26
CTNND1-227ENST00000530748 ZNF256Q9Y2P7 627 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-227ENST00000530748 KBTBD11-OT1A0A1B0GTJ5 212 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 CIRBPQ14011 172 aaKnown RBP7.17□□□□□ -1.26
CTNND1-227ENST00000530748 NHLRC3Q5JS37 347 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 PPP1R27Q86WC6 154 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 YAE1D1Q9NRH1 226 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 IGKV1D-43A0A0B4J1Z2 117 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 FOXI3A8MTJ6 420 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-227ENST00000530748 RAMP1O60894 148 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 FABP2P12104 132 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 HBBP68871 147 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 HIST1H1AQ02539 215 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-227ENST00000530748 ARPC1AQ92747 370 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 PQLC2LA1A4F0 135 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 SRIP30626 198 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 GPR61Q9BZJ8 451 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 PLSCR2Q9NRY7 297 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 C12orf77C9JDV5 145 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 H3BTX0 84 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 H7C2G1 150 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 UMODP07911 640 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 CENPWQ5EE01 88 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 LAIR2Q6ISS4 152 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 TMEM136Q6ZRR5 245 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 FAM168AQ92567 244 aa7.17□□□□□ -1.26
CTNND1-227ENST00000530748 TRIP12Q14669 1992 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-227ENST00000530748 ASIPP42127 132 aa7.16□□□□□ -1.26
CTNND1-227ENST00000530748 ZNF362Q5T0B9 420 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms