RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 RPP25LQ8N5L8 163 aaKnown RBP13.01□□□□□ -0.33
USH1C-204ENST00000526313 Q8N7P7 452 aa13.01□□□□□ -0.33
USH1C-204ENST00000526313 OR10G4Q8NGN3 311 aa13.01□□□□□ -0.33
USH1C-204ENST00000526313 TMEM170AQ8WVE7 144 aa13.01□□□□□ -0.33
USH1C-204ENST00000526313 AIFM2Q9BRQ8 373 aa13.01□□□□□ -0.33
USH1C-204ENST00000526313 LOC102723971A0A1B0GUV8 181 aa13□□□□□ -0.33
USH1C-204ENST00000526313 IGKV1D-33P01593 117 aa13□□□□□ -0.33
USH1C-204ENST00000526313 IGKV1-33P01594 117 aa13□□□□□ -0.33
USH1C-204ENST00000526313 SFTPCP11686 197 aa13□□□□□ -0.33
USH1C-204ENST00000526313 FGF7P21781 194 aa13□□□□□ -0.33
USH1C-204ENST00000526313 HAGHQ16775 308 aa13□□□□□ -0.33
USH1C-204ENST00000526313 RTL8BQ17RB0 113 aa13□□□□□ -0.33
USH1C-204ENST00000526313 ACSM6Q6P461 480 aa13□□□□□ -0.33
USH1C-204ENST00000526313 RAB39BQ96DA2 213 aa13□□□□□ -0.33
USH1C-204ENST00000526313 CLCC1Q96S66 551 aa13□□□□□ -0.33
USH1C-204ENST00000526313 NPCDR1Q9BY65 106 aa13□□□□□ -0.33
USH1C-204ENST00000526313 SLC35D1Q9NTN3 355 aa13□□□□□ -0.33
USH1C-204ENST00000526313 WDR83OSQ9Y284 106 aa13□□□□□ -0.33
USH1C-204ENST00000526313 MBP02144 154 aa13□□□□□ -0.33
USH1C-204ENST00000526313 PPOXP50336 477 aa13□□□□□ -0.33
USH1C-204ENST00000526313 RPS16P62249 146 aaKnown RBP13□□□□□ -0.33
USH1C-204ENST00000526313 SOHLH1Q5JUK2 328 aa13□□□□□ -0.33
USH1C-204ENST00000526313 C11orf42Q8N5U0 333 aa13□□□□□ -0.33
USH1C-204ENST00000526313 OR5AN1Q8NGI8 311 aa13□□□□□ -0.33
USH1C-204ENST00000526313 OR13D1Q8NGV5 346 aa13□□□□□ -0.33
USH1C-204ENST00000526313 H1FXQ92522 213 aaKnown RBP13□□□□□ -0.33
USH1C-204ENST00000526313 HEYLQ9NQ87 328 aaPredicted RBP13□□□□□ -0.33
USH1C-204ENST00000526313 ZNF257Q9Y2Q1 563 aa13□□□□□ -0.33
USH1C-204ENST00000526313 ANKHD1Q8IWZ3 2542 aaKnown RBP12.99□□□□□ -0.33
USH1C-204ENST00000526313 TRBV23-1A0A0A0MS06 115 aa12.99□□□□□ -0.33
USH1C-204ENST00000526313 SRRM4A7MD48 611 aaKnown RBP12.99□□□□□ -0.33
USH1C-204ENST00000526313 UPK2O00526 184 aa12.99□□□□□ -0.33
USH1C-204ENST00000526313 RRHO14718 337 aa12.99□□□□□ -0.33
USH1C-204ENST00000526313 IGKV1-16P04430 117 aa12.99□□□□□ -0.33
USH1C-204ENST00000526313 OR13C7P0DN81 318 aa12.99□□□□□ -0.33
USH1C-204ENST00000526313 COL8A2P25067 703 aa12.99□□□□□ -0.33
USH1C-204ENST00000526313 ZNF137PP52743 207 aa12.99□□□□□ -0.33
USH1C-204ENST00000526313 ZNF787Q6DD87 383 aa12.99□□□□□ -0.33
USH1C-204ENST00000526313 CA5BP1Q8WTZ4 195 aa12.99□□□□□ -0.33
USH1C-204ENST00000526313 ST6GALNAC6Q969X2 333 aa12.99□□□□□ -0.33
USH1C-204ENST00000526313 UNKLQ9H9P5 680 aaKnown RBP12.99□□□□□ -0.33
USH1C-204ENST00000526313 ATRXP46100 2492 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 J3QR06 171 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 IFNA10P01566 189 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 PAX6P26367 422 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 CD1BP29016 333 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 FAM122CQ6P4D5 195 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 ETV3LQ6ZN32 361 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 ABHD12Q8N2K0 398 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 BET1LQ9NYM9 111 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 PRNDQ9UKY0 176 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 H0YJW9 148 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 CTRB1P17538 263 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 ELLP55199 621 aaPredicted RBP12.98□□□□□ -0.33
USH1C-204ENST00000526313 TMEM177Q53S58 311 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 AWAT1Q58HT5 328 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 CTRB2Q6GPI1 263 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 LCN15Q6UWW0 184 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 ZNF841Q6ZN19 808 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 OSR1Q8TAX0 266 aaPredicted RBP12.98□□□□□ -0.33
USH1C-204ENST00000526313 MRPL20Q9BYC9 149 aaKnown RBP12.98□□□□□ -0.33
USH1C-204ENST00000526313 SMCO4Q9NRQ5 59 aa12.98□□□□□ -0.33
USH1C-204ENST00000526313 C7orf77A4D0Y5 90 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 MAP1LC3B2A6NCE7 125 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 SOX15O60248 233 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 MPDU1O75352 247 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 IGHV2-70P01814 119 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 DLK1P80370 383 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 RXFP4Q8TDU9 374 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 TMEM186Q96B77 213 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 MAP1LC3BQ9GZQ8 125 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 TUBA4BQ9H853 241 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 BCL2P10415 239 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 SLC39A9Q9NUM3 307 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 RALYQ9UKM9 306 aaKnown RBP12.97□□□□□ -0.33
USH1C-204ENST00000526313 OR51B2Q9Y5P1 312 aa12.97□□□□□ -0.33
USH1C-204ENST00000526313 CTXND1A0A1B0GTU2 59 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 C17orf112F2Z3M2 114 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 TSPAN9O75954 239 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 KBTBD11O94819 623 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 IGHV1-8P0DP01 117 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 HOXA1P49639 335 aaPredicted RBP12.96□□□□□ -0.33
USH1C-204ENST00000526313 RAB11AP62491 216 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 RHEBQ15382 184 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 FFAR4Q5NUL3 377 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 ZNF709Q8N972 641 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 OR9G1Q8NH87 305 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 NABP2Q9BQ15 211 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 GNG13Q9P2W3 67 aa12.96□□□□□ -0.33
USH1C-204ENST00000526313 COLCA2A8K830 154 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 LYNX1G3V0Z9 82 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 APOA2P02652 100 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 LYNX1P0DP58 116 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 FGF8P55075 233 aaPredicted RBP12.95□□□□□ -0.34
USH1C-204ENST00000526313 PRCDQ00LT1 54 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 TREML4Q6UXN2 200 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 UNQ6494/PRO21346Q6UXR6 183 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 CYB561D1Q8N8Q1 229 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 OR10G9Q8NGN4 311 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 OR10G7Q8NGN6 311 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms