RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 LTBP1Q14766 1721 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 HMGXB3Q12766 1538 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 EFCAB10A6NFE3 127 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 DPRXA6NFQ7 191 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 RIIAD1A6NNX1 92 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 IGLL5B9A064 214 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 APOA2P02652 100 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 GZMHP20718 246 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 SRP9P49458 86 aaKnown RBP3.62□□□□□ -1.83
USP47-204ENST00000525078 RAB13P51153 203 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 WNT4P56705 351 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 FGF12P61328 243 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 ZNF664Q8N3J9 261 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 MIR7-3HGQ8N6C7 128 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 ZNF721Q8TF20 911 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 ELSPBP1Q96BH3 223 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 IGF2BP2-AS1Q96M15 143 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 C1orf50Q9BV19 199 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 C1QTNF6Q9BXI9 259 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 NKX6-2Q9C056 277 aaPredicted RBP3.62□□□□□ -1.83
USP47-204ENST00000525078 ZNF586Q9NXT0 402 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 TVP23BQ9NYZ1 205 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 PTPN23Q9H3S7 1636 aa3.62□□□□□ -1.83
USP47-204ENST00000525078 HFM1A2PYH4 1435 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 DOCK5Q9H7D0 1870 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 SIGLEC16A6NMB1 481 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 UBE2L6O14933 153 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 SMIM10L2AP0DMW4 78 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 SMIM10L2BP0DMW5 78 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 NTF3P20783 257 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 G6PCP35575 357 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 ATP5G3P48201 142 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 TBPL1P62380 186 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 BAMBIQ13145 260 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 SCGB2B2Q4G0G5 96 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 BRMS1LQ5PSV4 323 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 GFI1BQ5VTD9 330 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 GPHB5Q86YW7 130 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 RNF175Q8N4F7 328 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 ZNF561Q8N587 486 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 PACRGLQ8N7B6 248 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 ZNF283Q8N7M2 679 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 ZFP62Q8NB50 900 aaPredicted RBP3.61□□□□□ -1.83
USP47-204ENST00000525078 ZNF675Q8TD23 568 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 SLC7A6Q92536 515 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 PYURFQ96I23 114 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 OR2D2Q9H210 308 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 RPUSD1Q9UJJ7 312 aaKnown RBP3.61□□□□□ -1.83
USP47-204ENST00000525078 ASB4Q9Y574 426 aa3.61□□□□□ -1.83
USP47-204ENST00000525078 MYH3P11055 1940 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 PLXNB3Q9ULL4 1909 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 TRIP11Q15643 1979 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 J3QRK9 145 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 PLA2G10O15496 165 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 ZNF861PO60384 105 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 TRGV3P03979 118 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 SRP19P09132 144 aaKnown RBP3.6□□□□□ -1.83
USP47-204ENST00000525078 TFPTP0C1Z6 253 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 CRABP2P29373 138 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 LPAL2Q16609 132 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 Q6Q795 121 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 AMTNQ6UX39 209 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 H1FOOQ8IZA3 346 aaPredicted RBP3.6□□□□□ -1.83
USP47-204ENST00000525078 DAND5Q8N907 189 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 OR5P3Q8WZ94 311 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 HIST1H2BAQ96A08 127 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 SPIN2AQ99865 258 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 SPIN2BQ9BPZ2 258 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 PBOV1Q9GZY1 135 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 TRAPPC1Q9Y5R8 145 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 NCOA3Q9Y6Q9 1424 aa3.6□□□□□ -1.83
USP47-204ENST00000525078 CEP170Q5SW79 1584 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 ABCA7Q8IZY2 2146 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 CC2D2AQ9P2K1 1620 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 CTTNBP2Q8WZ74 1663 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.59□□□□□ -1.83
USP47-204ENST00000525078 TRBV19A0A075B6N1 114 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 TRAV4A0A0B4J268 109 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 PINLYPA6NC86 204 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 C9JCJ5 164 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 I3L521 148 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 CCNKO75909 580 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 OR2J2O76002 312 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 IGKV1D-33P01593 117 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 IGKV1-33P01594 117 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 CGB3P0DN86 165 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 CGB7P0DN87 165 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 S100A7P31151 101 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 ZNF79Q15937 498 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 LYRM7Q5U5X0 104 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 TCF24Q7RTU0 167 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 CROCCP2Q86T23 111 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 EXOC3-AS1Q8N2X6 119 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 TOMM6Q96B49 74 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 STARD4Q96DR4 205 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 PFDN5Q99471 154 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 C20orf27Q9GZN8 174 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 DOCK3Q8IZD9 2030 aa3.59□□□□□ -1.83
USP47-204ENST00000525078 KTN1Q86UP2 1357 aaKnown RBP3.59□□□□□ -1.83
USP47-204ENST00000525078 PTPRTO14522 1441 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms