RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 RPEL1Q2QD12 228 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 SLC25A42Q86VD7 318 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 FAM223AQ8IWN6 122 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 PUSL1Q8N0Z8 303 aaKnown RBP14.21□□□□□ -0.13
CAPN1-203ENST00000525013 TTC9CQ8N5M4 171 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 TMEM167AQ8TBQ9 72 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 GIMAP1Q8WWP7 306 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 SLC25A46Q96AG3 418 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 FUNDC2Q9BWH2 189 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 COMMD3Q9UBI1 195 aa14.21□□□□□ -0.13
CAPN1-203ENST00000525013 STAB2Q8WWQ8 2551 aa14.2□□□□□ -0.14
CAPN1-203ENST00000525013 MAS1LP35410 378 aa14.2□□□□□ -0.14
CAPN1-203ENST00000525013 RFX2P48378 723 aa14.2□□□□□ -0.14
CAPN1-203ENST00000525013 NCS1P62166 190 aa14.2□□□□□ -0.14
CAPN1-203ENST00000525013 ZNF45Q02386 682 aa14.2□□□□□ -0.14
CAPN1-203ENST00000525013 EXOSC2Q13868 293 aaKnown RBP14.2□□□□□ -0.14
CAPN1-203ENST00000525013 TATDN3Q17R31 274 aa14.2□□□□□ -0.14
CAPN1-203ENST00000525013 OR9G4Q8NGQ1 327 aa14.2□□□□□ -0.14
CAPN1-203ENST00000525013 KCTD12Q96CX2 325 aaKnown RBP14.2□□□□□ -0.14
CAPN1-203ENST00000525013 AIFM2Q9BRQ8 373 aa14.2□□□□□ -0.14
CAPN1-203ENST00000525013 HRASLSQ9HDD0 168 aa14.2□□□□□ -0.14
CAPN1-203ENST00000525013 ADAM30Q9UKF2 790 aa14.2□□□□□ -0.14
CAPN1-203ENST00000525013 U3KQK5 164 aa14.2□□□□□ -0.14
CAPN1-203ENST00000525013 TEX22C9J3V5 150 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 OR2J3O76001 311 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 IGLV1-51P01701 117 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 PMP2P02689 132 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 IL6RP08887 468 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-203ENST00000525013 PRSS3P35030 304 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 VBP1P61758 197 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 RPL8P62917 257 aaKnown RBP14.19□□□□□ -0.14
CAPN1-203ENST00000525013 AADACL3Q5VUY0 350 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 ZNF818PQ6ZRF7 136 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 NECAP1Q8NC96 275 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 OR5H2Q8NGV7 314 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 OR51H1Q8NH63 302 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 WWC2-AS2Q96NR7 200 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 ZNF257Q9Y2Q1 563 aa14.19□□□□□ -0.14
CAPN1-203ENST00000525013 TRBV9A0A0B4J1U6 114 aa14.18□□□□□ -0.14
CAPN1-203ENST00000525013 SMIM31A0A1B0GVY4 71 aa14.18□□□□□ -0.14
CAPN1-203ENST00000525013 TRIM64CA6NLI5 447 aa14.18□□□□□ -0.14
CAPN1-203ENST00000525013 RBFOX2O43251 390 aaKnown RBP eCLIP14.18□□□□□ -0.14
CAPN1-203ENST00000525013 EIF4EP06730 217 aaKnown RBP14.18□□□□□ -0.14
CAPN1-203ENST00000525013 TAS2R46P59540 309 aa14.18□□□□□ -0.14
CAPN1-203ENST00000525013 C15orf32Q32M92 178 aa14.18□□□□□ -0.14
CAPN1-203ENST00000525013 OR4A47Q6IF82 309 aa14.18□□□□□ -0.14
CAPN1-203ENST00000525013 SLC2A9Q9NRM0 540 aa14.18□□□□□ -0.14
CAPN1-203ENST00000525013 E7EUB6 86 aa14.17□□□□□ -0.14
CAPN1-203ENST00000525013 HPRT1P00492 218 aa14.17□□□□□ -0.14
CAPN1-203ENST00000525013 ZNF735P0CB33 412 aa14.17□□□□□ -0.14
CAPN1-203ENST00000525013 MYOD1P15172 320 aa14.17□□□□□ -0.14
CAPN1-203ENST00000525013 HLA-GP17693 338 aa14.17□□□□□ -0.14
CAPN1-203ENST00000525013 C19orf35Q6ZS72 473 aa14.17□□□□□ -0.14
CAPN1-203ENST00000525013 BORCS5Q969J3 196 aa14.17□□□□□ -0.14
CAPN1-203ENST00000525013 ZNF2Q9BSG1 426 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-203ENST00000525013 BET1LQ9NYM9 111 aa14.17□□□□□ -0.14
CAPN1-203ENST00000525013 A0A1B0GW64 132 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 NPIPB5A8MRT5 1133 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 BMPR1BO00238 502 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 APOA1P02647 267 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 AREGP15514 252 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 NQO2P16083 231 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 GNRHRP30968 328 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 TAS2R31P59538 309 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 DHRS11Q6UWP2 260 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 IL34Q6ZMJ4 242 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 DMBX1Q8NFW5 382 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 OR4A5Q8NH83 315 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 CD300LFQ8TDQ1 290 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 MOB3AQ96BX8 217 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 FBXL7Q9UJT9 491 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 ANAPC10Q9UM13 185 aa14.16□□□□□ -0.14
CAPN1-203ENST00000525013 NBEAL2Q6ZNJ1 2754 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.15□□□□□ -0.14
CAPN1-203ENST00000525013 S1PR2O95136 353 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 DHFRP00374 187 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 REG1AP05451 166 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 CSN3P07498 182 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 FRMD6-AS1P0C7T7 363 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 DEFA4P12838 97 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 RPA2P15927 270 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 NAT1P18440 290 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 HLA-DMAP28067 261 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 SNX29P2Q8IUI4 249 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 OR6F1Q8NGZ6 308 aa14.15□□□□□ -0.14
CAPN1-203ENST00000525013 TRAV3A0A0B4J244 114 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 PPP5D1E7EU14 171 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 H0Y980 276 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 UPK2O00526 184 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 HPGDSO60760 199 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 RLN1P04808 185 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 PSMB6P28072 239 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 HRH1P35367 487 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 RORCP51449 518 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 LYSMD2Q8IV50 215 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 SBSPONQ8IVN8 264 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 CMTM1Q8IZ96 169 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 CMTM3Q96MX0 182 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 COMMD5Q9GZQ3 224 aa14.14□□□□□ -0.15
CAPN1-203ENST00000525013 PLEKHA2Q9HB19 425 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms