RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TMEM167AQ8TBQ9 72 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 GLYATL2Q8WU03 294 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 CLCC1Q96S66 551 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 ZNF702PQ9H963 129 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 CACFD1Q9UGQ2 172 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 MMP24Q9Y5R2 645 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 JMJD1CQ15652 2540 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 TRAV6A0A075B6T7 132 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 DUXBA0A1W2PPF3 345 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 KBTBD11O94819 623 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 HLA-AP01891 365 aaKnown RBP15.92■□□□□ 0.14
USP53-203ENST00000507597 OR4E1P0C645 316 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 G6PCP35575 357 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 TMEM187Q14656 261 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 OR4A47Q6IF82 309 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 ABHD5Q8WTS1 349 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 CHPT1Q8WUD6 406 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 TMEM56Q96MV1 263 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 OR51J1Q9H342 316 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 GPN1Q9HCN4 374 aaPredicted RBP15.92■□□□□ 0.14
USP53-203ENST00000507597 TMEM140Q9NV12 185 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 FLVCR2Q9UPI3 526 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 TMEM56-RWDD3S4R434 201 aa15.92■□□□□ 0.14
USP53-203ENST00000507597 PRAF2O60831 178 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 DHFRP00374 187 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 CA2P00918 260 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 RPL8P62917 257 aaKnown RBP15.91■□□□□ 0.14
USP53-203ENST00000507597 SLC35B1P78383 322 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 PPP1R1AQ13522 171 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 PRSS8Q16651 343 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 KRTAP24-1Q3LI83 254 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 TMEM268Q5VZI3 342 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 NRARPQ7Z6K4 114 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 LYG2Q86SG7 212 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 VKORC1L1Q8N0U8 176 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 OR4A16Q8NH70 328 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 LINC01006Q8NI28 216 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 TMEM68Q96MH6 324 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 C19orf24Q9BVV8 132 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 RNF114Q9Y508 228 aa15.91■□□□□ 0.14
USP53-203ENST00000507597 C9orf170A2RU37 121 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 UPK2O00526 184 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 RBMXL2O75526 392 aaKnown RBP15.9■□□□□ 0.14
USP53-203ENST00000507597 MECP2P51608 486 aaKnown RBP15.9■□□□□ 0.14
USP53-203ENST00000507597 GNB1P62873 340 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 SUPT4H1P63272 117 aaKnown RBP15.9■□□□□ 0.14
USP53-203ENST00000507597 CX3CL1P78423 397 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 RELBQ01201 579 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 FXYD3Q14802 87 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 TNXAQ16473 311 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 RGS21Q2M5E4 152 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 CASTOR1Q8WTX7 329 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 SEC22AQ96IW7 307 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 COMMD5Q9GZQ3 224 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 ZNF580Q9UK33 172 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 PRNDQ9UKY0 176 aa15.9■□□□□ 0.14
USP53-203ENST00000507597 IGHV7-81A0A0B4J1V7 117 aa15.89■□□□□ 0.13
USP53-203ENST00000507597 A0A0B4J2A0 478 aa15.89■□□□□ 0.13
USP53-203ENST00000507597 INMT-MINDY4F8WBC2 141 aa15.89■□□□□ 0.13
USP53-203ENST00000507597 DUS4LO95620 317 aaKnown RBP15.89■□□□□ 0.13
USP53-203ENST00000507597 ANXA7P20073 488 aaKnown RBP15.89■□□□□ 0.13
USP53-203ENST00000507597 VDAC1P21796 283 aa15.89■□□□□ 0.13
USP53-203ENST00000507597 THOC7Q6I9Y2 204 aaKnown RBP15.89■□□□□ 0.13
USP53-203ENST00000507597 CENPVQ7Z7K6 275 aaPredicted RBP15.89■□□□□ 0.13
USP53-203ENST00000507597 MRPL41Q8IXM3 137 aaKnown RBP15.89■□□□□ 0.13
USP53-203ENST00000507597 SELENOHQ8IZQ5 122 aaKnown RBP15.89■□□□□ 0.13
USP53-203ENST00000507597 ARPC1AQ92747 370 aa15.89■□□□□ 0.13
USP53-203ENST00000507597 LSM10Q969L4 123 aaKnown RBP15.89■□□□□ 0.13
USP53-203ENST00000507597 PHB2Q99623 299 aa15.89■□□□□ 0.13
USP53-203ENST00000507597 SPIN2AQ99865 258 aa15.89■□□□□ 0.13
USP53-203ENST00000507597 SPIN2BQ9BPZ2 258 aa15.89■□□□□ 0.13
USP53-203ENST00000507597 PDCD10Q9BUL8 212 aa15.89■□□□□ 0.13
USP53-203ENST00000507597 ZNF430Q9H8G1 570 aaPredicted RBP15.89■□□□□ 0.13
USP53-203ENST00000507597 PARP11Q9NR21 331 aa15.89■□□□□ 0.13
USP53-203ENST00000507597 SHPKQ9UHJ6 478 aa15.89■□□□□ 0.13
USP53-203ENST00000507597 NF1P21359 2839 aa15.88■□□□□ 0.13
USP53-203ENST00000507597 IGF1P05019 195 aa15.88■□□□□ 0.13
USP53-203ENST00000507597 IL5P05113 134 aa15.88■□□□□ 0.13
USP53-203ENST00000507597 HLA-GP17693 338 aa15.88■□□□□ 0.13
USP53-203ENST00000507597 DHRS2Q13268 280 aa15.88■□□□□ 0.13
USP53-203ENST00000507597 LRTM2Q8N967 370 aa15.88■□□□□ 0.13
USP53-203ENST00000507597 RBMXL1Q96E39 390 aaKnown RBP15.88■□□□□ 0.13
USP53-203ENST00000507597 SH2D7A6NKC9 451 aaPredicted RBP15.87■□□□□ 0.13
USP53-203ENST00000507597 FCN1O00602 326 aa15.87■□□□□ 0.13
USP53-203ENST00000507597 IFNA21P01568 189 aa15.87■□□□□ 0.13
USP53-203ENST00000507597 IGKV1-39P01597 117 aa15.87■□□□□ 0.13
USP53-203ENST00000507597 IGKV1D-39P04432 117 aa15.87■□□□□ 0.13
USP53-203ENST00000507597 IL6RP08887 468 aaPredicted RBP15.87■□□□□ 0.13
USP53-203ENST00000507597 RPL27AP46776 148 aaKnown RBP15.87■□□□□ 0.13
USP53-203ENST00000507597 COMMD1Q8N668 190 aa15.87■□□□□ 0.13
USP53-203ENST00000507597 SGMS2Q8NHU3 365 aa15.87■□□□□ 0.13
USP53-203ENST00000507597 HSPB9Q9BQS6 159 aa15.87■□□□□ 0.13
USP53-203ENST00000507597 MARVELD1Q9BSK0 173 aa15.87■□□□□ 0.13
USP53-203ENST00000507597 TPSG1Q9NRR2 321 aa15.87■□□□□ 0.13
USP53-203ENST00000507597 TMED3Q9Y3Q3 217 aa15.87■□□□□ 0.13
USP53-203ENST00000507597 MDKP21741 143 aaPredicted RBP15.86■□□□□ 0.13
USP53-203ENST00000507597 COMPP49747 757 aaPredicted RBP15.86■□□□□ 0.13
USP53-203ENST00000507597 AKIRIN2Q53H80 203 aa15.86■□□□□ 0.13
USP53-203ENST00000507597 C12orf54Q6X4T0 127 aa15.86■□□□□ 0.13
USP53-203ENST00000507597 HSD17B13Q7Z5P4 300 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms