RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 ROS1P08922 2347 aa12.63□□□□□ -0.39
SNCAIP-207ENST00000504884 IL6RP08887 468 aaPredicted RBP12.63□□□□□ -0.39
SNCAIP-207ENST00000504884 HOXA1P49639 335 aaPredicted RBP12.63□□□□□ -0.39
SNCAIP-207ENST00000504884 ACSM6Q6P461 480 aa12.63□□□□□ -0.39
SNCAIP-207ENST00000504884 MUC15Q8N387 334 aa12.63□□□□□ -0.39
SNCAIP-207ENST00000504884 C8orf31Q8N9H6 132 aa12.63□□□□□ -0.39
SNCAIP-207ENST00000504884 OR13D1Q8NGV5 346 aa12.63□□□□□ -0.39
SNCAIP-207ENST00000504884 TUBA4BQ9H853 241 aa12.63□□□□□ -0.39
SNCAIP-207ENST00000504884 CTSZQ9UBR2 303 aa12.63□□□□□ -0.39
SNCAIP-207ENST00000504884 WDR83OSQ9Y284 106 aa12.63□□□□□ -0.39
SNCAIP-207ENST00000504884 MAP1LC3B2A6NCE7 125 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 SOX15O60248 233 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 MPDU1O75352 247 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 GRNP28799 593 aaKnown RBP12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 ADORA2A-AS1P86434 159 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 TFF3Q07654 80 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 FFAR4Q5NUL3 377 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 ABHD12Q8N2K0 398 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 LINC00311Q8N616 119 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 OR10G9Q8NGN4 311 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 OR10G7Q8NGN6 311 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 MAP1LC3BQ9GZQ8 125 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 ENY2Q9NPA8 101 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 PRNDQ9UKY0 176 aa12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 PUS1Q9Y606 427 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNCAIP-207ENST00000504884 RRHO14718 337 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 IFNA1P01562 189 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 IGKV1D-33P01593 117 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 IGKV1-33P01594 117 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 BCL2P10415 239 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 PAX6P26367 422 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 LOXP28300 417 aaPredicted RBP12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 FGF8P55075 233 aaPredicted RBP12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 HNF4GQ14541 408 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 ZNF672Q499Z4 452 aaPredicted RBP12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 RBMS3Q6XE24 437 aaKnown RBP12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 SSX7Q7RTT5 188 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 C15orf54Q8N8G6 183 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 ZNF596Q8TC21 504 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 CA5BP1Q8WTZ4 195 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 LHX4Q969G2 390 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 C20orf24Q9BUV8 137 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 ACTR3CQ9C0K3 210 aaPredicted RBP12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 ZNRD1Q9P1U0 126 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 ZNF257Q9Y2Q1 563 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 CTXND1A0A1B0GTU2 59 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 ZFP92A6NM28 416 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 COLCA2A8K830 154 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 UPK2O00526 184 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 FSTL3O95633 263 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 APOA2P02652 100 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 DLK1P80370 383 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 FAM71F2Q6NXP2 309 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 CYB561D1Q8N8Q1 229 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 OSR1Q8TAX0 266 aaPredicted RBP12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 TMEM186Q96B77 213 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 P2RX4Q99571 388 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 FKBP11Q9NYL4 201 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 VAX2Q9UIW0 290 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 OR51B2Q9Y5P1 312 aa12.61□□□□□ -0.39
SNCAIP-207ENST00000504884 ARFGEF3Q5TH69 2177 aa12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 H3BQ15 152 aa12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 J3QR06 171 aa12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 CYB5BO43169 146 aa12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 IGKV1-16P04430 117 aa12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 IFNA4P05014 189 aa12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 FBP1P09467 338 aa12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 SFTPCP11686 197 aa12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 AKR1C3P42330 323 aa12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 ACOT6Q3I5F7 207 aaPredicted RBP12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 TMEM155Q4W5P6 130 aa12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 OR10X1Q8NGY0 326 aa12.6□□□□□ -0.39
SNCAIP-207ENST00000504884 TRBV23-1A0A0A0MS06 115 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 SRRM4A7MD48 611 aaKnown RBP12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 PRSS46E5RG02 174 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 SIAH2O43255 324 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 KBTBD11O94819 623 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 CEBPGP53567 150 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 DLX6P56179 175 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 FLI1Q01543 452 aaPredicted RBP12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 FAM122CQ6P4D5 195 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 OR5AN1Q8NGI8 311 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 BET1LQ9NYM9 111 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 A0A087X0M5 115 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 A0A1B0GX30 115 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 COL8A2P25067 703 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 NPY1RP25929 384 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 SLC24A4Q8NFF2 622 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 TMEM170AQ8WVE7 144 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 NIPSNAP3BQ9BS92 247 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 TMEM204Q9BSN7 226 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 MRPL20Q9BYC9 149 aaKnown RBP12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 MLXQ9UH92 298 aa12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 RALYQ9UKM9 306 aaKnown RBP12.59□□□□□ -0.39
SNCAIP-207ENST00000504884 SMCO3A2RU48 225 aa12.58□□□□□ -0.4
SNCAIP-207ENST00000504884 H0YJW9 148 aa12.58□□□□□ -0.4
SNCAIP-207ENST00000504884 TAGLN2P37802 199 aaKnown RBP12.58□□□□□ -0.4
SNCAIP-207ENST00000504884 PPOXP50336 477 aa12.58□□□□□ -0.4
SNCAIP-207ENST00000504884 ATP5IP56385 69 aaPredicted RBP12.58□□□□□ -0.4
SNCAIP-207ENST00000504884 TREML4Q6UXN2 200 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms