RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 PPP1R27Q86WC6 154 aa9.09□□□□□ -0.95
CTTN-208ENST00000498223 FAM71E2Q8N5Q1 922 aa9.09□□□□□ -0.95
CTTN-208ENST00000498223 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.09□□□□□ -0.95
CTTN-208ENST00000498223 DUSP18Q8NEJ0 188 aa9.09□□□□□ -0.95
CTTN-208ENST00000498223 COQ8AQ8NI60 647 aa9.09□□□□□ -0.95
CTTN-208ENST00000498223 GLYATL2Q8WU03 294 aa9.09□□□□□ -0.95
CTTN-208ENST00000498223 RBPMSQ93062 196 aaKnown RBP9.09□□□□□ -0.95
CTTN-208ENST00000498223 GALNT14Q96FL9 552 aa9.09□□□□□ -0.95
CTTN-208ENST00000498223 OR2A7Q96R45 310 aa9.09□□□□□ -0.95
CTTN-208ENST00000498223 TPSG1Q9NRR2 321 aa9.09□□□□□ -0.95
CTTN-208ENST00000498223 TMEM140Q9NV12 185 aa9.09□□□□□ -0.95
CTTN-208ENST00000498223 NBEAL1Q6ZS30 2694 aa9.09□□□□□ -0.95
CTTN-208ENST00000498223 C9orf170A2RU37 121 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 FCN1O00602 326 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 KBTBD11O94819 623 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 PTTG1O95997 202 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 CA2P00918 260 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 IGKV1-39P01597 117 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 IGKV1D-39P04432 117 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 SPNP16150 400 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 VDAC2P45880 294 aaPredicted RBP9.08□□□□□ -0.96
CTTN-208ENST00000498223 SUPT4H1P63272 117 aaKnown RBP9.08□□□□□ -0.96
CTTN-208ENST00000498223 FXYD3Q14802 87 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 FOXRED2Q8IWF2 684 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 MMD2Q8IY49 270 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 SELENOHQ8IZQ5 122 aaKnown RBP9.08□□□□□ -0.96
CTTN-208ENST00000498223 UXS1Q8NBZ7 420 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 OR52B4Q8NGK2 314 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 OR4F5Q8NH21 305 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 OR4A16Q8NH70 328 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 PHB2Q99623 299 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 SEC22CQ9BRL7 303 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 ZNF430Q9H8G1 570 aaPredicted RBP9.08□□□□□ -0.96
CTTN-208ENST00000498223 ZNF702PQ9H963 129 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 GPN1Q9HCN4 374 aaPredicted RBP9.08□□□□□ -0.96
CTTN-208ENST00000498223 PARP11Q9NR21 331 aa9.08□□□□□ -0.96
CTTN-208ENST00000498223 PIGBOS1A0A0B4J2F0 54 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 UPK2O00526 184 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 KCNAB3O43448 404 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 NDUFA7O95182 113 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 CDS2O95674 445 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 HLA-DRB1P01911 266 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 CRYGBP07316 175 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 HKR1P10072 659 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 CX3CL1P78423 397 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 PJVKQ0ZLH3 352 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 DHRS2Q13268 280 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 POU2AF1Q16633 256 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 PRSS8Q16651 343 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 ANKRD55Q3KP44 614 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 Q6ZS46 218 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 PUSL1Q8N0Z8 303 aaKnown RBP9.07□□□□□ -0.96
CTTN-208ENST00000498223 OR4A5Q8NH83 315 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 GRPEL2Q8TAA5 225 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 LHFPL5Q8TAF8 219 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 SEC22AQ96IW7 307 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 HSPB9Q9BQS6 159 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 ALX4Q9H161 411 aaPredicted RBP9.07□□□□□ -0.96
CTTN-208ENST00000498223 BET1LQ9NYM9 111 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 NSG2Q9Y328 171 aa9.07□□□□□ -0.96
CTTN-208ENST00000498223 HAX1O00165 279 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 TSPAN9O75954 239 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 DUS4LO95620 317 aaKnown RBP9.06□□□□□ -0.96
CTTN-208ENST00000498223 HOXB5P09067 269 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 OR9G9P0C7N8 305 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 RPL8P62917 257 aaKnown RBP9.06□□□□□ -0.96
CTTN-208ENST00000498223 RELBQ01201 579 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 TMEM95Q3KNT9 176 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 SLC35G3Q8N808 338 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 TMEM167AQ8TBQ9 72 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 ARPC1AQ92747 370 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 IL22RA2Q969J5 263 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 TMEM56Q96MV1 263 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 FYTTD1Q96QD9 318 aaKnown RBP9.06□□□□□ -0.96
CTTN-208ENST00000498223 HINT2Q9BX68 163 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 COMMD5Q9GZQ3 224 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 OR51J1Q9H342 316 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 LINC00527Q9UJ94 153 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 PRNDQ9UKY0 176 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 MMP24Q9Y5R2 645 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 TMEM56-RWDD3S4R434 201 aa9.06□□□□□ -0.96
CTTN-208ENST00000498223 IGHV7-81A0A0B4J1V7 117 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 TRAV3A0A0B4J244 114 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 A0A0B4J2A0 478 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 LINC01548A6NM66 108 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 AP4M1O00189 453 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 PRAF2O60831 178 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 IFNA21P01568 189 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 IGKV1-5P01602 117 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 IGHG2P01859 326 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 OPN1MWP04001 364 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 IL5P05113 134 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 OPN1MW2P0DN77 364 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 OPN1MW3P0DN78 364 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 HLA-GP17693 338 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 MDKP21741 143 aaPredicted RBP9.05□□□□□ -0.96
CTTN-208ENST00000498223 VDAC1P21796 283 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 MAS1LP35410 378 aa9.05□□□□□ -0.96
CTTN-208ENST00000498223 RPL27AP46776 148 aaKnown RBP9.05□□□□□ -0.96
CTTN-208ENST00000498223 OR2B8PP59922 312 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms