RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 FBXL15Q9H469 300 aa9.19□□□□□ -0.94
LSM2-214ENST00000493387 BEX1Q9HBH7 125 aa9.19□□□□□ -0.94
LSM2-214ENST00000493387 TMEM140Q9NV12 185 aa9.19□□□□□ -0.94
LSM2-214ENST00000493387 ANK3Q12955 4377 aaKnown RBP9.19□□□□□ -0.94
LSM2-214ENST00000493387 SNRPGP15A8MWD9 76 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 KCNAB3O43448 404 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 ACTL6BO94805 426 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 KBTBD11O94819 623 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 NDUFA7O95182 113 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 IGKV1-39P01597 117 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 IGKV1D-39P04432 117 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 AMY1AP04745 511 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 SPNP16150 400 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 VDAC1P21796 283 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 G6PCP35575 357 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 PRSS8Q16651 343 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 OR4A47Q6IF82 309 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 ZNF562Q6V9R5 426 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 VKORC1L1Q8N0U8 176 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 CHPT1Q8WUD6 406 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 MITD1Q8WV92 249 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 FKBP11Q9NYL4 201 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 CACFD1Q9UGQ2 172 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 PRNDQ9UKY0 176 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 MMP24Q9Y5R2 645 aa9.18□□□□□ -0.94
LSM2-214ENST00000493387 UPK2O00526 184 aa9.17□□□□□ -0.94
LSM2-214ENST00000493387 TSPAN9O75954 239 aa9.17□□□□□ -0.94
LSM2-214ENST00000493387 IFNA21P01568 189 aa9.17□□□□□ -0.94
LSM2-214ENST00000493387 IL6RP08887 468 aaPredicted RBP9.17□□□□□ -0.94
LSM2-214ENST00000493387 RPL8P62917 257 aaKnown RBP9.17□□□□□ -0.94
LSM2-214ENST00000493387 ANKRD55Q3KP44 614 aa9.17□□□□□ -0.94
LSM2-214ENST00000493387 C9orf152Q5JTZ5 239 aa9.17□□□□□ -0.94
LSM2-214ENST00000493387 Q8N2B8 174 aa9.17□□□□□ -0.94
LSM2-214ENST00000493387 C12orf45Q8N5I9 185 aaPredicted RBP9.17□□□□□ -0.94
LSM2-214ENST00000493387 OR4F5Q8NH21 305 aa9.17□□□□□ -0.94
LSM2-214ENST00000493387 OR4A16Q8NH70 328 aa9.17□□□□□ -0.94
LSM2-214ENST00000493387 LHFPL5Q8TAF8 219 aa9.17□□□□□ -0.94
LSM2-214ENST00000493387 RBMXL1Q96E39 390 aaKnown RBP9.17□□□□□ -0.94
LSM2-214ENST00000493387 TMED3Q9Y3Q3 217 aa9.17□□□□□ -0.94
LSM2-214ENST00000493387 A0A1B0GUS0 222 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 CNIH1O95406 144 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 IGKV1-5P01602 117 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 IGHG2P01859 326 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 P0C879 139 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 SLC25A6P12236 298 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 HLA-GP17693 338 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 BLCAPP62952 87 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 CX3CL1P78423 397 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 ARSJQ5FYB0 599 aaPredicted RBP9.16□□□□□ -0.94
LSM2-214ENST00000493387 SLC35E3Q7Z769 313 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 FOXRED2Q8IWF2 684 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 SLC35G3Q8N808 338 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 OR52B4Q8NGK2 314 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 OR2T6Q8NHC8 308 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 CLCC1Q96S66 551 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 SPIN2AQ99865 258 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 SPIN2BQ9BPZ2 258 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 SEC22CQ9BRL7 303 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 C16orf95Q9H693 158 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 ZNF430Q9H8G1 570 aaPredicted RBP9.16□□□□□ -0.94
LSM2-214ENST00000493387 ZNF702PQ9H963 129 aa9.16□□□□□ -0.94
LSM2-214ENST00000493387 IGHV7-81A0A0B4J1V7 117 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 A0A1B0GU03 582 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 AP4M1O00189 453 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 FCN1O00602 326 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 RBMXL2O75526 392 aaKnown RBP9.15□□□□□ -0.94
LSM2-214ENST00000493387 CA2P00918 260 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 HKR1P10072 659 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 FXYD3Q14802 87 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 TNXAQ16473 311 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 TATDN3Q17R31 274 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 THOC7Q6I9Y2 204 aaKnown RBP9.15□□□□□ -0.94
LSM2-214ENST00000493387 Q6ZSV7 163 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 LYZL2Q7Z4W2 148 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 ARPC1AQ92747 370 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 TMEM68Q96MH6 324 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 GON7Q9BXV9 100 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 COMMD5Q9GZQ3 224 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 OR51J1Q9H342 316 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 TPSG1Q9NRR2 321 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.15□□□□□ -0.94
LSM2-214ENST00000493387 COA4Q9NYJ1 87 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 PRR13Q9NZ81 148 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 ZNF580Q9UK33 172 aa9.15□□□□□ -0.94
LSM2-214ENST00000493387 JMJD1CQ15652 2540 aa9.14□□□□□ -0.95
LSM2-214ENST00000493387 C7orf66A4D0T2 115 aa9.14□□□□□ -0.95
LSM2-214ENST00000493387 C15orf61A6NNL5 157 aa9.14□□□□□ -0.95
LSM2-214ENST00000493387 HOXB5P09067 269 aa9.14□□□□□ -0.95
LSM2-214ENST00000493387 OR9G9P0C7N8 305 aa9.14□□□□□ -0.95
LSM2-214ENST00000493387 SULT1A3P0DMM9 295 aa9.14□□□□□ -0.95
LSM2-214ENST00000493387 SULT1A4P0DMN0 295 aa9.14□□□□□ -0.95
LSM2-214ENST00000493387 VDAC2P45880 294 aaPredicted RBP9.14□□□□□ -0.95
LSM2-214ENST00000493387 RPL27AP46776 148 aaKnown RBP9.14□□□□□ -0.95
LSM2-214ENST00000493387 COMPP49747 757 aaPredicted RBP9.14□□□□□ -0.95
LSM2-214ENST00000493387 GNB1P62873 340 aa9.14□□□□□ -0.95
LSM2-214ENST00000493387 RELBQ01201 579 aa9.14□□□□□ -0.95
LSM2-214ENST00000493387 TMEM267Q0VDI3 215 aaPredicted RBP9.14□□□□□ -0.95
LSM2-214ENST00000493387 PJVKQ0ZLH3 352 aa9.14□□□□□ -0.95
LSM2-214ENST00000493387 SMCO1Q147U7 214 aa9.14□□□□□ -0.95
LSM2-214ENST00000493387 NMSQ5H8A3 153 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms