RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SPIN2BQ9BPZ2 258 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 ELOVL1Q9BW60 279 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 COMMD3Q9UBI1 195 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 SMAD5-AS1Q9Y6J3 95 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 S4R3C0 116 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 OR2J3O76001 311 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 BRI3O95415 125 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 IGHV3-23P01764 117 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 REG1AP05451 166 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 AREGP15514 252 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 RPA2P15927 270 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 RPL27AP46776 148 aaKnown RBP10.71□□□□□ -0.69
VTI1A-206ENST00000489142 HERV-K104P61576 105 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 RPEL1Q2QD12 228 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 ANKRD13BQ86YJ7 626 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 TTC9CQ8N5M4 171 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 TMEM167AQ8TBQ9 72 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 USMG5Q96IX5 58 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 NAA50Q9GZZ1 169 aaKnown RBP10.71□□□□□ -0.69
VTI1A-206ENST00000489142 HRASLSQ9HDD0 168 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 U3KQK5 164 aa10.71□□□□□ -0.69
VTI1A-206ENST00000489142 TRAV3A0A0B4J244 114 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 PPP5D1E7EU14 171 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 BMPR1BO00238 502 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 TMEM127O75204 238 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 HRASP01112 189 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 SMIM18P0DKX4 95 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 KIR2DS2P43631 304 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 ATP5G2Q06055 141 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 C15orf32Q32M92 178 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 AADACL3Q5VUY0 350 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 OR4A47Q6IF82 309 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 IL34Q6ZMJ4 242 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 OR9G4Q8NGQ1 327 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 VSTM2AQ8TAG5 236 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 GIMAP1Q8WWP7 306 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 ZNF2Q9BSG1 426 aaPredicted RBP10.7□□□□□ -0.7
VTI1A-206ENST00000489142 ANAPC10Q9UM13 185 aa10.7□□□□□ -0.7
VTI1A-206ENST00000489142 TRBV9A0A0B4J1U6 114 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 DPPA5A6NC42 116 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 CGB1A6NKQ9 187 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 FAM223BA6NKX1 122 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 HPGDSO60760 199 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 S1PR2O95136 353 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 IGLV1-51P01701 117 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 HLA-AP01891 365 aaKnown RBP10.69□□□□□ -0.7
VTI1A-206ENST00000489142 RLN1P04808 185 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 FRMD6-AS1P0C7T7 363 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 ZNF735P0CB33 412 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 HLA-DMAP28067 261 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 GNRHRP30968 328 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 RPL8P62917 257 aaKnown RBP10.69□□□□□ -0.7
VTI1A-206ENST00000489142 CATR1Q13166 79 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 MSMO1Q15800 293 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 RNASE12Q5GAN4 147 aaKnown RBP10.69□□□□□ -0.7
VTI1A-206ENST00000489142 SNX29P2Q8IUI4 249 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 FAM223AQ8IWN6 122 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 OR5H2Q8NGV7 314 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 FXYD6Q9H0Q3 95 aa10.69□□□□□ -0.7
VTI1A-206ENST00000489142 CSN3P07498 182 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 NHLRC4P0CG21 123 aaPredicted RBP10.68□□□□□ -0.7
VTI1A-206ENST00000489142 HLA-GP17693 338 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 ELK1P19419 428 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 EDN2P20800 178 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 PRSS3P35030 304 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 HRH1P35367 487 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 LYSMD2Q8IV50 215 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 SBSPONQ8IVN8 264 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 NECAP1Q8NC96 275 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 ZBTB34Q8NCN2 500 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 DMBX1Q8NFW5 382 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 MOB3AQ96BX8 217 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 WWC2-AS2Q96NR7 200 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 SLC2A9Q9NRM0 540 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 BET1LQ9NYM9 111 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 FBXL7Q9UJT9 491 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 ZNF257Q9Y2Q1 563 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 SELENOKQ9Y6D0 94 aa10.68□□□□□ -0.7
VTI1A-206ENST00000489142 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.67□□□□□ -0.7
VTI1A-206ENST00000489142 IZUMO1RA6ND01 250 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 NPIPB5A8MRT5 1133 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 NDUFB8O95169 186 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 HPRT1P00492 218 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 NAT1P18440 290 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 PSMB6P28072 239 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 MAS1LP35410 378 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 TAS2R46P59540 309 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 DHRS11Q6UWP2 260 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 SLC25A42Q86VD7 318 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 KCTD12Q96CX2 325 aaKnown RBP10.67□□□□□ -0.7
VTI1A-206ENST00000489142 FANCD2OSQ96PS1 177 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 TMEM140Q9NV12 185 aa10.67□□□□□ -0.7
VTI1A-206ENST00000489142 UPK2O00526 184 aa10.66□□□□□ -0.7
VTI1A-206ENST00000489142 RBFOX2O43251 390 aaKnown RBP eCLIP10.66□□□□□ -0.7
VTI1A-206ENST00000489142 PGLYRP1O75594 196 aaPredicted RBP10.66□□□□□ -0.7
VTI1A-206ENST00000489142 APOA1P02647 267 aa10.66□□□□□ -0.7
VTI1A-206ENST00000489142 NQO2P16083 231 aa10.66□□□□□ -0.7
VTI1A-206ENST00000489142 TAS2R31P59538 309 aa10.66□□□□□ -0.7
VTI1A-206ENST00000489142 OR2B8PP59922 312 aa10.66□□□□□ -0.7
VTI1A-206ENST00000489142 CTF1Q16619 201 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms