RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 CELSR2Q9HCU4 2923 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 UNC79Q9P2D8 2635 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 RNF222A6NCQ9 220 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 SRRM4A7MD48 611 aaKnown RBP8.07□□□□□ -1.12
USP11-211ENST00000489111 UPK2O00526 184 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 KCNAB3O43448 404 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 BCL2L11O43521 198 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 SLC25A17O43808 307 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 CHST1O43916 411 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 KBTBD11O94819 623 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 VENTXO95231 258 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 LY86O95711 162 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 FGF2P09038 288 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 IAPPP10997 89 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 S100A11P31949 105 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 BRS3P32247 399 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 HOXA1P49639 335 aaPredicted RBP8.07□□□□□ -1.12
USP11-211ENST00000489111 SPCS3P61009 180 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 RELBQ01201 579 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 OPCMLQ14982 345 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 PLGLAQ15195 96 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 AARDQ4LEZ3 155 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 CYB5R2Q6BCY4 276 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 PUSL1Q8N0Z8 303 aaKnown RBP8.07□□□□□ -1.12
USP11-211ENST00000489111 OR2C3Q8N628 320 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 WFDC11Q8NEX6 87 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 DTD1Q8TEA8 209 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 CFHR4Q92496 578 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 RNF5Q99942 180 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 SLC25A31Q9H0C2 315 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 ENY2Q9NPA8 101 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 TMEM14BQ9NUH8 114 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 FKBP11Q9NYL4 201 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 FAM96BQ9Y3D0 163 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 OR51B2Q9Y5P1 312 aa8.07□□□□□ -1.12
USP11-211ENST00000489111 TRAV3A0A0B4J244 114 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 MSGN1A6NI15 193 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 SPDEFO95238 335 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 MOSP00540 346 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 IGKV1D-33P01593 117 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 IGKV1-33P01594 117 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 IGLV2-23P01705 113 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 SNRNP70P08621 437 aaKnown RBP8.06□□□□□ -1.12
USP11-211ENST00000489111 HKR1P10072 659 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 TAS2R30P59541 319 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 RPL8P62917 257 aaKnown RBP8.06□□□□□ -1.12
USP11-211ENST00000489111 HABP2Q14520 560 aaPredicted RBP8.06□□□□□ -1.12
USP11-211ENST00000489111 HNF4GQ14541 408 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 MMDQ15546 238 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 SPINK9Q5DT21 86 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 RUSC1-AS1Q66K80 236 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 ZNF429Q86V71 674 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 STX12Q86Y82 276 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 DYNAPQ8N1N2 210 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 TEX45Q8NA69 505 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 OR2T10Q8NGZ9 312 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 OR52E5Q8NH55 327 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 TMEM167AQ8TBQ9 72 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 C17orf50Q8WW18 174 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 RBMXL1Q96E39 390 aaKnown RBP8.06□□□□□ -1.12
USP11-211ENST00000489111 ARPC5LQ9BPX5 153 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 HINT2Q9BX68 163 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 COMMD5Q9GZQ3 224 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 LYRM2Q9NU23 88 aaPredicted RBP8.06□□□□□ -1.12
USP11-211ENST00000489111 PSENENQ9NZ42 101 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 KIAA1456Q9P272 454 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 TCF19Q9Y242 345 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 WSB1Q9Y6I7 421 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 DSCAML1Q8TD84 2053 aa8.06□□□□□ -1.12
USP11-211ENST00000489111 H3BP45 60 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 SMAD7O15105 426 aaKnown RBP8.05□□□□□ -1.12
USP11-211ENST00000489111 NBR2O15453 112 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 ACTL6BO94805 426 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 FAM106CPP0CH98 169 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 IGHV4-38-2P0DP08 117 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 TMEM11P17152 192 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 PAX6P26367 422 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 HSPE1P61604 102 aaKnown RBP8.05□□□□□ -1.12
USP11-211ENST00000489111 RPP30P78346 268 aaKnown RBP8.05□□□□□ -1.12
USP11-211ENST00000489111 EWSR1Q01844 656 aaKnown RBP eCLIP8.05□□□□□ -1.12
USP11-211ENST00000489111 PSG5Q15238 335 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 BRD3OSQ6XYD6 125 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 PIP4P2Q8N4L2 257 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 OR5B3Q8NH48 314 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 ZDHHC16Q969W1 377 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 SMIM8Q96KF7 97 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 GON7Q9BXV9 100 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 HIPK2Q9H2X6 1198 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 C11orf1Q9H5F2 150 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 SLA2Q9H6Q3 261 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 PLEKHA3Q9HB20 300 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 HEYLQ9NQ87 328 aaPredicted RBP8.05□□□□□ -1.12
USP11-211ENST00000489111 METTL1Q9UBP6 276 aaKnown RBP8.05□□□□□ -1.12
USP11-211ENST00000489111 PAIP2BQ9ULR5 123 aaKnown RBP8.05□□□□□ -1.12
USP11-211ENST00000489111 ZNF257Q9Y2Q1 563 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 ANKRD17O75179 2603 aaKnown RBP8.05□□□□□ -1.12
USP11-211ENST00000489111 APCP25054 2843 aa8.05□□□□□ -1.12
USP11-211ENST00000489111 ARID1AO14497 2285 aa8.04□□□□□ -1.12
USP11-211ENST00000489111 A0A0U1RQK1 487 aa8.04□□□□□ -1.12
USP11-211ENST00000489111 IGSF23A1L1A6 192 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms