RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 SAP30O75446 220 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 DHFRP00374 187 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 HRASP01112 189 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 HLA-DQB1P01920 261 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 FGF2P09038 288 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 EGR2P11161 476 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-215ENST00000484203 MALP21145 153 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 DUTP33316 252 aaKnown RBP4.76□□□□□ -1.65
PTCD3-215ENST00000484203 SDC2P34741 201 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 MAS1LP35410 378 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 GNB1P62873 340 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 NDPQ00604 133 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 PRSS8Q16651 343 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 OVCH2Q7RTZ1 564 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 FAM223AQ8IWN6 122 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 MMD2Q8IY49 270 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 OR4S2Q8NH73 311 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 S100A16Q96FQ6 103 aaKnown RBP4.76□□□□□ -1.65
PTCD3-215ENST00000484203 DUX3Q96PT4 197 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 CLCC1Q96S66 551 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 PHB2Q99623 299 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 DCUN1D5Q9BTE7 237 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 GNB4Q9HAV0 340 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 ZNF230Q9UIE0 474 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-215ENST00000484203 ANXA10Q9UJ72 324 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 SPATA2Q9UM82 520 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 RBMX2Q9Y388 322 aaKnown RBP4.76□□□□□ -1.65
PTCD3-215ENST00000484203 SMAD5-AS1Q9Y6J3 95 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 PLXNB1O43157 2135 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 NBEAL2Q6ZNJ1 2754 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 LOC100506127A0A0U1RQW1 187 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 TMEM235A6NFC5 223 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 MPPED1O15442 326 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 CYB5BO43169 146 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 RBFOX2O43251 390 aaKnown RBP eCLIP4.75□□□□□ -1.65
PTCD3-215ENST00000484203 AIREO43918 545 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 SOX15O60248 233 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 TUSC2O75896 110 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 OR2A4O95047 310 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 TNFAIP8O95379 198 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 CRYZL1O95825 349 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 IGLV2-23P01705 113 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 CRYGBP07316 175 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 S100GP29377 79 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 CATR1Q13166 79 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 FHL2Q14192 279 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 CDK10Q15131 360 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 IDNKQ5T6J7 187 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 ACSM6Q6P461 480 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 KCTD9Q7L273 389 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 C5orf24Q7Z6I8 188 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 NR2C2APQ86WQ0 139 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 HOGA1Q86XE5 327 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 ANKRD13BQ86YJ7 626 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 BEST4Q8NFU0 473 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 OR4A5Q8NH83 315 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 LGALS14Q8TCE9 139 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 DDB2Q92466 427 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 DCUN1D4Q92564 292 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 SNAPC3Q92966 411 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 OR5B12Q96R08 314 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 OR2A7Q96R45 310 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 MLST8Q9BVC4 326 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 TINAGL1Q9GZM7 467 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-215ENST00000484203 SIGLEC8Q9NYZ4 499 aa4.75□□□□□ -1.65
PTCD3-215ENST00000484203 PEF1Q9UBV8 284 aaKnown RBP4.75□□□□□ -1.65
PTCD3-215ENST00000484203 LSM4Q9Y4Z0 139 aaKnown RBP4.75□□□□□ -1.65
PTCD3-215ENST00000484203 TRAV18A0A075B6X5 111 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 SMIM31A0A1B0GVY4 71 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 DPPA5A6NC42 116 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 MSGN1A6NI15 193 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 XRCC3O43542 346 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 FCGR3BO75015 233 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 OR9G9P0C7N8 305 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 HIST1H1BP16401 226 aaKnown RBP4.74□□□□□ -1.65
PTCD3-215ENST00000484203 NFYAP23511 347 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-215ENST00000484203 TAS2R46P59540 309 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 ATP5G2Q06055 141 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 PLA2G7Q13093 441 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 NEDD8Q15843 81 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 TNXAQ16473 311 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 THOC7Q6I9Y2 204 aaKnown RBP4.74□□□□□ -1.65
PTCD3-215ENST00000484203 ZNF343Q6P1L6 599 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 HSD17B13Q7Z5P4 300 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-215ENST00000484203 CMTM1Q8IZ96 169 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 TTC9CQ8N5M4 171 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 NECAP1Q8NC96 275 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 TSPAN14Q8NG11 270 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 OR5T1Q8NG75 326 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 OR2K2Q8NGT1 345 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 C15orf40Q8WUR7 153 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 NUDCD2Q8WVJ2 157 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 TCTEX1D2Q8WW35 142 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 GIMAP1Q8WWP7 306 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 SRSF12Q8WXF0 261 aaKnown RBP4.74□□□□□ -1.65
PTCD3-215ENST00000484203 ACOT12Q8WYK0 555 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 MAFIPQ8WZ33 124 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 DLX4Q92988 240 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-215ENST00000484203 CMTM3Q96MX0 182 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 MS4A10Q96PG2 267 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms