RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 CNIH1O95406 144 aa12.71□□□□□ -0.37
COL2A1-206ENST00000483376 AP3S2P59780 193 aa12.71□□□□□ -0.37
COL2A1-206ENST00000483376 IDO2Q6ZQW0 420 aa12.71□□□□□ -0.37
COL2A1-206ENST00000483376 MRGPRFQ96AM1 343 aa12.71□□□□□ -0.37
COL2A1-206ENST00000483376 NBEAL1Q6ZS30 2694 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 SOX15O60248 233 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 B3GALNT1O75752 331 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 RPLP1P05386 114 aaKnown RBP12.7□□□□□ -0.38
COL2A1-206ENST00000483376 CTSDP07339 412 aaPredicted RBP12.7□□□□□ -0.38
COL2A1-206ENST00000483376 KLF9Q13886 244 aaPredicted RBP12.7□□□□□ -0.38
COL2A1-206ENST00000483376 KIAA0141Q14154 515 aaPredicted RBP12.7□□□□□ -0.38
COL2A1-206ENST00000483376 ECSCRQ19T08 205 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 ZNF585BQ52M93 769 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 PYDC2Q56P42 97 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 HIST2H2BDQ6DRA6 164 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 UNQ5815/PRO19632Q6UWF5 114 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 TBC1D26Q86UD7 250 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 ZNF695Q8IW36 515 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 LFNGQ8NES3 379 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 SRSF12Q8WXF0 261 aaKnown RBP12.7□□□□□ -0.38
COL2A1-206ENST00000483376 R3HDM4Q96D70 268 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 UBE2E2Q96LR5 201 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 SPIN2AQ99865 258 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 SPIN2BQ9BPZ2 258 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 FAM103A1Q9BTL3 118 aaKnown RBP12.7□□□□□ -0.38
COL2A1-206ENST00000483376 SRRQ9GZT4 340 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 SLA2Q9H6Q3 261 aa12.7□□□□□ -0.38
COL2A1-206ENST00000483376 A0A1W2PN81 502 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 MARCH11A6NNE9 402 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 MPPED1O15442 326 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 ACTL6BO94805 426 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 S1PR2O95136 353 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 RPA2P15927 270 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 FAUP35544 74 aaKnown RBP12.69□□□□□ -0.38
COL2A1-206ENST00000483376 CHRNA7P36544 502 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 RAB9AP51151 201 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 RUNX1Q01196 453 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 SCGB2B2Q4G0G5 96 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 PHLDA2Q53GA4 152 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 ASPHD1Q5U4P2 390 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 OR4A47Q6IF82 309 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 TMEM65Q6PI78 240 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 VKORC1L1Q8N0U8 176 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 GDPD1Q8N9F7 314 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 WFDC9Q8NEX5 89 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 GRPEL2Q8TAA5 225 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 ABHD5Q8WTS1 349 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 SCP2D1Q9UJQ7 156 aa12.69□□□□□ -0.38
COL2A1-206ENST00000483376 H0Y980 276 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 PGAM2P15259 253 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 CD40LGP29965 261 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 PIGPP57054 158 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 GNB1P62873 340 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 RPL8P62917 257 aaKnown RBP12.68□□□□□ -0.38
COL2A1-206ENST00000483376 TNXAQ16473 311 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 KHDC1LQ5JSQ8 128 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 FAAP20Q6NZ36 180 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 ZNF491Q8N8L2 437 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 CCDC71LQ8N9Z2 235 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 OR13C8Q8NGS7 320 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 C4orf3Q8WVX3 66 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 SRSF8Q9BRL6 282 aaKnown RBP12.68□□□□□ -0.38
COL2A1-206ENST00000483376 KLK15Q9H2R5 256 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 BATF3Q9NR55 127 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 GPR132Q9UNW8 380 aa12.68□□□□□ -0.38
COL2A1-206ENST00000483376 A0A1W2PRX2 142 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 PF4V1P10720 104 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 HLA-GP17693 338 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 MYCNOSP40205 109 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 LPAR6P43657 344 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 PPP5CP53041 499 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 ERVK-16P61578 105 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 ZNF45Q02386 682 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 ETV3LQ6ZN32 361 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 TOMM5Q8N4H5 51 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 KLHL30-AS1Q8NEE0 82 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 OR51S1Q8NGJ8 323 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 FAM110DQ8TAY7 271 aaPredicted RBP12.67□□□□□ -0.38
COL2A1-206ENST00000483376 MARCH1Q8TCQ1 289 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 SCGB3A2Q96PL1 93 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 TMEM140Q9NV12 185 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 VSIG4Q9Y279 399 aa12.67□□□□□ -0.38
COL2A1-206ENST00000483376 MSGN1A6NI15 193 aa12.66□□□□□ -0.38
COL2A1-206ENST00000483376 UPK2O00526 184 aa12.66□□□□□ -0.38
COL2A1-206ENST00000483376 RPL27AP46776 148 aaKnown RBP12.66□□□□□ -0.38
COL2A1-206ENST00000483376 KLK9Q2XQG4 91 aa12.66□□□□□ -0.38
COL2A1-206ENST00000483376 THOC7Q6I9Y2 204 aaKnown RBP12.66□□□□□ -0.38
COL2A1-206ENST00000483376 SSX9Q7RTT3 188 aa12.66□□□□□ -0.38
COL2A1-206ENST00000483376 SLC25A42Q86VD7 318 aa12.66□□□□□ -0.38
COL2A1-206ENST00000483376 P2RX4Q99571 388 aa12.66□□□□□ -0.38
COL2A1-206ENST00000483376 RTBDNQ9BSG5 229 aaPredicted RBP12.66□□□□□ -0.38
COL2A1-206ENST00000483376 HRASLSQ9HDD0 168 aa12.66□□□□□ -0.38
COL2A1-206ENST00000483376 COPZ2Q9P299 210 aa12.66□□□□□ -0.38
COL2A1-206ENST00000483376 KLK9Q9UKQ9 250 aa12.66□□□□□ -0.38
COL2A1-206ENST00000483376 TEX22C9J3V5 150 aa12.65□□□□□ -0.38
COL2A1-206ENST00000483376 I3L521 148 aa12.65□□□□□ -0.38
COL2A1-206ENST00000483376 OR9G9P0C7N8 305 aa12.65□□□□□ -0.38
COL2A1-206ENST00000483376 PI3P19957 117 aa12.65□□□□□ -0.38
COL2A1-206ENST00000483376 FHL3Q13643 280 aa12.65□□□□□ -0.38
COL2A1-206ENST00000483376 LCNL1Q6ZST4 164 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms