RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 KRASP01116 189 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 G6PCP35575 357 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 VDAC2P45880 294 aaPredicted RBP9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 PROK1P58294 105 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 ERVK-16P61578 105 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 SSBP2P81877 361 aaPredicted RBP9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 AWAT1Q58HT5 328 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 MMD2Q8IY49 270 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 DMBX1Q8NFW5 382 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 OR4A5Q8NH83 315 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 TMEM56Q96MV1 263 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 CLCC1Q96S66 551 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 WNT10AQ9GZT5 417 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 C20orf85Q9H1P6 137 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 OR51J1Q9H342 316 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 ZNF430Q9H8G1 570 aaPredicted RBP9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 ZNF580Q9UK33 172 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 RNF114Q9Y508 228 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 TMEM56-RWDD3S4R434 201 aa9.77□□□□□ -0.85
SHROOM3-205ENST00000481002 AP4M1O00189 453 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 UPK2O00526 184 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 CREBL2O60519 120 aaPredicted RBP9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 ATG12O94817 140 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 CA2P00918 260 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 IGF1P05019 195 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 FGF2P09038 288 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 P0C879 139 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 EGR2P11161 476 aaPredicted RBP9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 MAS1LP35410 378 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 MECP2P51608 486 aaKnown RBP9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 CRIP2P52943 208 aaPredicted RBP9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 PPP1R1AQ13522 171 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 TRIM16LQ309B1 348 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 TMEM95Q3KNT9 176 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 ARSJQ5FYB0 599 aaPredicted RBP9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 NRARPQ7Z6K4 114 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 FOXRED2Q8IWF2 684 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 SELENOHQ8IZQ5 122 aaKnown RBP9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 LHFPL5Q8TAF8 219 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 RBPMSQ93062 196 aaKnown RBP9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 IL22RA2Q969J5 263 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 MDFIQ99750 246 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 TMEM140Q9NV12 185 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 NUDT15Q9NV35 164 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 NUBP2Q9Y5Y2 271 aa9.76□□□□□ -0.85
SHROOM3-205ENST00000481002 TRAV6A0A075B6T7 132 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 TRAV3A0A0B4J244 114 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 C9orf170A2RU37 121 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 ATP6V0E1O15342 81 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 SFT2D2O95562 160 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 IGKV1-5P01602 117 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 H2AFB2P0C5Z0 115 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 OR4E1P0C645 316 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 ANXA3P12429 323 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 ANXA7P20073 488 aaKnown RBP9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 RPL8P62917 257 aaKnown RBP9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 SRPXP78539 464 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 NDPQ00604 133 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 FXYD3Q14802 87 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 H2BFWTQ7Z2G1 175 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 STPG2Q8N412 459 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 ENKURQ8TC29 256 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 WIPF2Q8TF74 440 aaPredicted RBP9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 CHPT1Q8WUD6 406 aa9.75□□□□□ -0.85
SHROOM3-205ENST00000481002 PIGBOS1A0A0B4J2F0 54 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 CNIH1O95406 144 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 OR9G9P0C7N8 305 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 VAMP1P23763 118 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 DHRS2Q13268 280 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 DCTN2Q13561 401 aaKnown RBP9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 TNXAQ16473 311 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 ANKRD55Q3KP44 614 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 TMEM268Q5VZI3 342 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 LYG2Q86SG7 212 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 ZNF695Q8IW36 515 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 FAM219AQ8IW50 185 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 LGI3Q8N145 548 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 LRTM2Q8N967 370 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 SGMS2Q8NHU3 365 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 ARPC1AQ92747 370 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 NOL4LQ96MY1 436 aaPredicted RBP9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 PARP11Q9NR21 331 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 FBXO7Q9Y3I1 522 aa9.74□□□□□ -0.85
SHROOM3-205ENST00000481002 A0A0B4J2A0 478 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 SNAPC5O75971 98 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 ACTL6BO94805 426 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 DUS4LO95620 317 aaKnown RBP9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 HLA-GP17693 338 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 AKR1C2P52895 323 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 GNB1P62873 340 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 TMEM267Q0VDI3 215 aaPredicted RBP9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 AKIRIN2Q53H80 203 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 C19orf54Q5BKX5 351 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 PLET1Q6UQ28 207 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 CENPVQ7Z7K6 275 aaPredicted RBP9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 KLHDC1Q8N7A1 406 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 SRSF12Q8WXF0 261 aaKnown RBP9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 LSM10Q969L4 123 aaKnown RBP9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 RRNAD1Q96FB5 475 aaKnown RBP9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 MARVELD1Q9BSK0 173 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms