RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SFT2D2O95562 160 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 CA2P00918 260 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 CRYGBP07316 175 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 OR4E1P0C645 316 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 HKR1P10072 659 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 GNB1P62873 340 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 SRPXP78539 464 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 TMEM187Q14656 261 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 TMEM268Q5VZI3 342 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 C12orf54Q6X4T0 127 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 Q6ZS46 218 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 SLC35E3Q7Z769 313 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 PPP1R27Q86WC6 154 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 ZNF695Q8IW36 515 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 PUSL1Q8N0Z8 303 aaKnown RBP12.13□□□□□ -0.47
SEC13-215ENST00000477547 DUSP18Q8NEJ0 188 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 OR4F5Q8NH21 305 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 GLYATL2Q8WU03 294 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 RBPMSQ93062 196 aaKnown RBP12.13□□□□□ -0.47
SEC13-215ENST00000477547 OR2A7Q96R45 310 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 BET1LQ9NYM9 111 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 TENM1Q9UKZ4 2725 aa12.13□□□□□ -0.47
SEC13-215ENST00000477547 TSPAN9O75954 239 aa12.12□□□□□ -0.47
SEC13-215ENST00000477547 ATG12O94817 140 aa12.12□□□□□ -0.47
SEC13-215ENST00000477547 SPNP16150 400 aa12.12□□□□□ -0.47
SEC13-215ENST00000477547 VDAC2P45880 294 aaPredicted RBP12.12□□□□□ -0.47
SEC13-215ENST00000477547 DHRS2Q13268 280 aa12.12□□□□□ -0.47
SEC13-215ENST00000477547 LIN54Q6MZP7 749 aa12.12□□□□□ -0.47
SEC13-215ENST00000477547 LYG2Q86SG7 212 aa12.12□□□□□ -0.47
SEC13-215ENST00000477547 Q8N2B8 174 aa12.12□□□□□ -0.47
SEC13-215ENST00000477547 TMEM167AQ8TBQ9 72 aa12.12□□□□□ -0.47
SEC13-215ENST00000477547 ABHD5Q8WTS1 349 aa12.12□□□□□ -0.47
SEC13-215ENST00000477547 SEC22AQ96IW7 307 aa12.12□□□□□ -0.47
SEC13-215ENST00000477547 ZNF430Q9H8G1 570 aaPredicted RBP12.12□□□□□ -0.47
SEC13-215ENST00000477547 IGHV7-81A0A0B4J1V7 117 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 C9orf170A2RU37 121 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 CDS2O95674 445 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 IGKV1-5P01602 117 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 MECP2P51608 486 aaKnown RBP12.11□□□□□ -0.47
SEC13-215ENST00000477547 NDPQ00604 133 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 PJVKQ0ZLH3 352 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 TNXAQ16473 311 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 PRSS8Q16651 343 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 RGS21Q2M5E4 152 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 ANKRD55Q3KP44 614 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 H2BFWTQ7Z2G1 175 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 MMD2Q8IY49 270 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 LGI3Q8N145 548 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 SLC35G3Q8N808 338 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 OR4A5Q8NH83 315 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 IL22RA2Q969J5 263 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 TMEM56Q96MV1 263 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 PARP11Q9NR21 331 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 TMEM56-RWDD3S4R434 201 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 FCN1O00602 326 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 ACTL6BO94805 426 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 IGHG2P01859 326 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 OR2B8PP59922 312 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 RPL8P62917 257 aaKnown RBP12.11□□□□□ -0.47
SEC13-215ENST00000477547 CX3CL1P78423 397 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 MRGPRG-AS1Q2M3A8 158 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 FOXRED2Q8IWF2 684 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 SELENOHQ8IZQ5 122 aaKnown RBP12.11□□□□□ -0.47
SEC13-215ENST00000477547 OR52B4Q8NGK2 314 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 GRPEL2Q8TAA5 225 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 ARPC1AQ92747 370 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 RRNAD1Q96FB5 475 aaKnown RBP12.11□□□□□ -0.47
SEC13-215ENST00000477547 SEC22CQ9BRL7 303 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 ALX4Q9H161 411 aaPredicted RBP12.11□□□□□ -0.47
SEC13-215ENST00000477547 OR51J1Q9H342 316 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 C16orf95Q9H693 158 aa12.11□□□□□ -0.47
SEC13-215ENST00000477547 TGP01266 2768 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 TRAV3A0A0B4J244 114 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 PIGBOS1A0A0B4J2F0 54 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 INMT-MINDY4F8WBC2 141 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 AP4M1O00189 453 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 UPK2O00526 184 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 CNIH1O95406 144 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 DUS4LO95620 317 aaKnown RBP12.1□□□□□ -0.47
SEC13-215ENST00000477547 OR9G9P0C7N8 305 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 MDKP21741 143 aaPredicted RBP12.1□□□□□ -0.47
SEC13-215ENST00000477547 SSBP2P81877 361 aaPredicted RBP12.1□□□□□ -0.47
SEC13-215ENST00000477547 C10orf55Q5SWW7 151 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 LINC01006Q8NI28 216 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 COQ8AQ8NI60 647 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 SERTAD4Q9NUC0 356 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 MMP24Q9Y5R2 645 aa12.1□□□□□ -0.47
SEC13-215ENST00000477547 A0A0B4J2A0 478 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 A0A0G2JRQ6 117 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 DUXBA0A1W2PPF3 345 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 SNAPC5O75971 98 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 P0C879 139 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 HLA-GP17693 338 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 FOXL1Q12952 345 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 FXYD3Q14802 87 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 ECSCRQ19T08 205 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 IZUMO4Q1ZYL8 232 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 ZNF562Q6V9R5 426 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 FAM219AQ8IW50 185 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms